Spa_g03410 (PUB26)

Aliases : PUB26

Description : not classified & original description: none

Gene families : OG0000127 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000127_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Spa_g03410

Target	Alias	Description	ECC score	Gene Family Method
AT3G02840	No alias	ARM repeat superfamily protein	0.06	OrthoFinder output from all 47 species
AT3G18710	PUB29, ATPUB29	plant U-box 29	0.06	OrthoFinder output from all 47 species
AT3G19380	PUB25	plant U-box 25	0.03	OrthoFinder output from all 47 species
Adi_g003285	PUB25	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g014414	PUB25	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g077173	PUB25	U-Box-group-III E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g077175	PUB26	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g05204	PUB26	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Ala_g06990	PUB23	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g10929	PUB26	U-Box-group-III E3 ubiquitin ligase & original description: none	0.06	OrthoFinder output from all 47 species
Als_g20402	PUB26	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Als_g37093	PUB26	U-Box-group-III E3 ubiquitin ligase & original description: none	0.02	OrthoFinder output from all 47 species
Als_g61569	PUB26	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Aspi01Gene18452.t1	PUB25, Aspi01Gene18452	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene18453.t1	PUB25, Aspi01Gene18453	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene18467.t1	PUB23, Aspi01Gene18467	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene19337.t1	PUB26, Aspi01Gene19337	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene19351.t1	Aspi01Gene19351	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene19355.t1	PUB26, Aspi01Gene19355	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene19374.t1	Aspi01Gene19374	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene51615.t1	PUB15, Aspi01Gene51615	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene51624.t1	PUB15, Aspi01Gene51624	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0084.g038964	PUB25	U-Box-group-III E3 ubiquitin ligase & original...	0.06	OrthoFinder output from all 47 species
Cba_g27489	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Cba_g56659	PUB26	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Ceric.07G004600.1	PUB26, Ceric.07G004600	E3 ubiquitin ligase & original description:...	0.04	OrthoFinder output from all 47 species
Ceric.08G042000.1	Ceric.08G042000	E3 ubiquitin ligase & original description:...	0.04	OrthoFinder output from all 47 species
Ceric.08G065500.1	PUB26, Ceric.08G065500	U-Box-group-III E3 ubiquitin ligase & original...	0.04	OrthoFinder output from all 47 species
Ceric.10G007700.1	PUB23, Ceric.10G007700	not classified & original description: pacid=50612519...	0.04	OrthoFinder output from all 47 species
Ceric.21G081600.1	PUB26, Ceric.21G081600	U-Box-group-III E3 ubiquitin ligase & original...	0.04	OrthoFinder output from all 47 species
Ceric.25G045400.1	Ceric.25G045400	not classified & original description: pacid=50593359...	0.06	OrthoFinder output from all 47 species
Dac_g07515	PUB25	not classified & original description: none	0.07	OrthoFinder output from all 47 species
Dcu_g07421	PUB23	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g11691	PUB26	not classified & original description: none	0.1	OrthoFinder output from all 47 species
Dcu_g18955	PUB26	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Dcu_g26825	PUB26	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g46168	PUB23	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g01464	PUB26	E3 ubiquitin ligase & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g24916	PUB25	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Ehy_g16356	PUB22	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g21913	PUB26	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01011139001	PUB23	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
GSVIVT01011140001	PUB23	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
GSVIVT01011616001	CMPG1, ATCMPG1	U-box domain-containing protein 20 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
GSVIVT01026764001	PUB22	E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis thaliana	0.05	OrthoFinder output from all 47 species
GSVIVT01031720001	PUB26	U-box domain-containing protein 26 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
Gb_02628	No alias	U-box domain-containing protein 21 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Gb_02634	No alias	U-box domain-containing protein 21 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
Gb_02635	No alias	U-box domain-containing protein 21 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
LOC_Os02g33680.1	CMPG2, ATCMPG2,...	U-box domain-containing protein 29 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
MA_10425865g0010	PUB25	U-box domain-containing protein 25 OS=Arabidopsis...	0.05	OrthoFinder output from all 47 species
MA_10432981g0010	PUB22	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
MA_9494855g0010	PUB26	U-box domain-containing protein 25 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Mp2g06090.1	PUB25	E3 ubiquitin ligase (PUB)	0.02	OrthoFinder output from all 47 species
Mp3g11730.1	PUB25	E3 ubiquitin ligase (PUB)	0.03	OrthoFinder output from all 47 species
Mp3g22750.1	PUB26	U-box domain-containing protein 26 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Mp7g11020.1	PUB25	E3 ubiquitin ligase (PUB)	0.02	OrthoFinder output from all 47 species
Msp_g11599	PUB23	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g47390	PUB25	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g15868	PUB23	E3 ubiquitin ligase & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g29886	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Pir_g12470	PUB26	U-Box-group-III E3 ubiquitin ligase & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g34239	No alias	E3 ubiquitin ligase & original description: none	0.09	OrthoFinder output from all 47 species
Pnu_g12004	PUB26	U-Box-group-III E3 ubiquitin ligase & original description: none	0.05	OrthoFinder output from all 47 species
Ppi_g32476	PUB25	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g42738	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0033.g011093	PUB23	not classified & original description: CDS=1-1278	0.03	OrthoFinder output from all 47 species
Smo416356	PUB26	U-box domain-containing protein 30 OS=Arabidopsis thaliana	0.05	OrthoFinder output from all 47 species
Solyc01g007000.4.1	PUB22, Solyc01g007000	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Solyc01g007010.2.1	PUB22, Solyc01g007010	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Solyc01g007020.4.1	PUB23, Solyc01g007020	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Solyc01g007030.3.1	PUB22, Solyc01g007030	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Solyc01g007040.4.1	PUB22, Solyc01g007040	E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Solyc05g056500.1.1	PUB26, Solyc05g056500	U-box domain-containing protein 26 OS=Arabidopsis...	0.05	OrthoFinder output from all 47 species
Solyc06g074140.1.1	PUB24, Solyc06g074140	E3 ubiquitin-protein ligase PUB24 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Solyc11g005700.1.1	CMPG2, ATCMPG2,...	E3 ubiquitin ligase (PUB)	0.04	OrthoFinder output from all 47 species
Spa_g00706	PUB23	E3 ubiquitin ligase & original description: none	0.05	OrthoFinder output from all 47 species
Spa_g47017	PUB23	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e002598_P001	Zm00001e002598	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Zm00001e014779_P001	PUB26, Zm00001e014779	U-box domain-containing protein 26 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Zm00001e036030_P001	Zm00001e036030	U-box domain-containing protein 21 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
Zm00001e039417_P001	PUB23, Zm00001e039417	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004672	protein kinase activity	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003613	Ubox_domain	7	78

External Links

No external refs found!

Spa_g03410 (PUB26)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation