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  5. Spa_g03352

Spa_g03352 (AGP41)


Aliases : AGP41

Description : not classified & original description: none


Gene families : OG0003275 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003275_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g03352
Cluster HCCA: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
Ala_g34170 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene62368.t1 AtAGP20, AGP20,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0011.g012680 No alias not classified & original description: CDS=53-286 0.03 OrthoFinder output from all 47 species
GSVIVT01015262001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01019489001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01027049001 No alias No description available 0.02 OrthoFinder output from all 47 species
LOC_Os01g46850.1 LOC_Os01g46850 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os05g12580.1 LOC_Os05g12580 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g59793 AtAGP20, AGP20 not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_120230g0010 AtAGP20, AGP20 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001701 ATAGP22, AGP22 not classified & original description: CDS=1-333 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0069.g016488 AGP16, ATAGP16 not classified & original description: CDS=83-316 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0806.g027738 AGP16, ATAGP16 not classified & original description: CDS=83-316 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s3300.g028712 AGP16, ATAGP16 not classified & original description: CDS=83-316 0.04 OrthoFinder output from all 47 species
Solyc01g095515.1.1 AGP16, ATAGP16,... no hits & (original description: none) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR009424 AGP16/20/22/41 64 96
No external refs found!