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  5. Spa_g03221

Spa_g03221 (HTA6)


Aliases : HTA6

Description : histone *(H2A) & original description: none


Gene families : OG0000117 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000117_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g03221

Target Alias Description ECC score Gene Family Method Actions
AT5G59870 HTA6 histone H2A 6 0.02 OrthoFinder output from all 47 species
Adi_g011159 GAMMA-H2AX,... histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g33311 RAT5, HTA1, ATHTA1 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g39361 HTA6 histone *(H2A) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene24487.t1 GAMMA-H2AX,... histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g11808 HTA6 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01014580001 No alias Chromatin organisation.histones.H2A-type histone 0.03 OrthoFinder output from all 47 species
LOC_Os01g31800.1 HTA12, LOC_Os01g31800 histone (H2A) 0.02 OrthoFinder output from all 47 species
MA_11514g0010 HTA10 histone (H2A) 0.02 OrthoFinder output from all 47 species
Mp3g00840.1 HTA10 histone (H2A) 0.03 OrthoFinder output from all 47 species
Msp_g04700 HTA7 histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g11307 HTA10 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g16546 HTA7 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03457 GAMMA-H2AX,... histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g16293 GAMMA-H2AX,... histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016757 glycosyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 13 92
IPR032454 Histone_H2A_C 95 127
No external refs found!