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  5. Spa_g03199

Spa_g03199


Description : E3 ubiquitin ligase *(RMA/MUSE) & original description: none


Gene families : OG0000266 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000266_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g03199
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00264430 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
AMTR_s00048p00164020 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
AT4G27470 RMA3, ATRMA3 RING membrane-anchor 3 0.02 OrthoFinder output from all 47 species
Adi_g024921 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g072154 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g07901 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16158 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g35414 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene53965.t1 Aspi01Gene53965 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.10G009900.1 Ceric.10G009900 E3 ubiquitin ligase *(RMA/MUSE) & original description:... 0.03 OrthoFinder output from all 47 species
Ehy_g11588 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01001365001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
GSVIVT01014361001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
Lfl_g04855 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc10g008400.1.1 RMA1, ATRMA1,... RING-HC-class E3 ligase 0.03 OrthoFinder output from all 47 species
Spa_g05542 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g41039 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e007434_P001 RMA3, ATRMA3,... RING-HC-class E3 ligase 0.02 OrthoFinder output from all 47 species
Zm00001e041298_P002 RMA1, ATRMA1,... RING-HC-class E3 ligase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004806 triglyceride lipase activity IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0016298 lipase activity IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!