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  5. Spa_g02846

Spa_g02846 (STH)


Aliases : STH

Description : BBX class-IV transcription factor & original description: none


Gene families : OG0000403 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000403_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g02846
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01024204001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
Nbi_g40701 STH BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18396 STH BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0009056 catabolic process IEP HCCA
MF GO:0016151 nickel cation binding IEP HCCA
BP GO:0019627 urea metabolic process IEP HCCA
BP GO:0043419 urea catabolic process IEP HCCA
BP GO:0043605 amide catabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0071941 nitrogen cycle metabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000315 Znf_B-box 52 93
IPR000315 Znf_B-box 4 46
No external refs found!