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  4. Sequence
  5. Spa_g02339

Spa_g02339


Description : not classified & original description: none


Gene families : OG0000144 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000144_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g02339

Target Alias Description ECC score Gene Family Method Actions
AT3G12630 No alias A20/AN1-like zinc finger family protein 0.02 OrthoFinder output from all 47 species
Adi_g009351 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g058477 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g22674 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g45722 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05656 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g15148 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g25513 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os06g41010.1 LOC_Os06g41010 Zinc finger A20 and AN1 domain-containing... 0.02 OrthoFinder output from all 47 species
Lfl_g00472 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g00614 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g06968 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g21543 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g22069 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g10982 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g15817 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g20480 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g36990 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g19904 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g02780 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13125 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g31313 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006081 No alias not classified & original description: CDS=1-825 0.04 OrthoFinder output from all 47 species
Sam_g11115 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc12g100060.1.1 Solyc12g100060 Zinc finger A20 and AN1 domain-containing... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004408 holocytochrome-c synthase activity IEP HCCA
MF GO:0004478 methionine adenosyltransferase activity IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
BP GO:0006417 regulation of translation IEP HCCA
BP GO:0006448 regulation of translational elongation IEP HCCA
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010608 post-transcriptional regulation of gene expression IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016846 carbon-sulfur lyase activity IEP HCCA
BP GO:0017182 peptidyl-diphthamide metabolic process IEP HCCA
BP GO:0017183 peptidyl-diphthamide biosynthetic process from peptidyl-histidine IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018202 peptidyl-histidine modification IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0034248 regulation of amide metabolic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0046500 S-adenosylmethionine metabolic process IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0090560 2-(3-amino-3-carboxypropyl)histidine synthase activity IEP HCCA
BP GO:1900247 regulation of cytoplasmic translational elongation IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!