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  5. Spa_g01899

Spa_g01899


Description : not classified & original description: none


Gene families : OG0000543 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000543_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g01899

Target Alias Description ECC score Gene Family Method Actions
AT3G58000 No alias VQ motif-containing protein 0.03 OrthoFinder output from all 47 species
Aev_g40084 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g40085 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene66306.t1 Aspi01Gene66306 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.26G063200.1 Ceric.26G063200 not classified & original description: pacid=50599234... 0.02 OrthoFinder output from all 47 species
Ceric.26G063300.1 Ceric.26G063300 not classified & original description: pacid=50599964... 0.03 OrthoFinder output from all 47 species
Dcu_g16199 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g19374 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g20584 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g26356 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01001356001 No alias No description available 0.05 OrthoFinder output from all 47 species
Len_g47910 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g29411 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_122594g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_183879g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g34122 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g26310 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001904 No alias not classified & original description: CDS=1-351 0.03 OrthoFinder output from all 47 species
Spa_g39696 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint signaling IEP HCCA
BP GO:0000077 DNA damage checkpoint signaling IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0010564 regulation of cell cycle process IEP HCCA
BP GO:0010948 negative regulation of cell cycle process IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0020037 heme binding IEP HCCA
CC GO:0030896 checkpoint clamp complex IEP HCCA
BP GO:0031570 DNA integrity checkpoint signaling IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0042770 signal transduction in response to DNA damage IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0045786 negative regulation of cell cycle IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901987 regulation of cell cycle phase transition IEP HCCA
BP GO:1901988 negative regulation of cell cycle phase transition IEP HCCA
InterPro domains Description Start Stop
IPR008889 VQ 65 89
No external refs found!