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  5. Aev_g19107

Aev_g19107


Description : not classified & original description: none


Gene families : OG0001248 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001248_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g19107
Cluster HCCA: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00046p00193590 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Azfi_s0051.g031432 No alias not classified & original description: CDS=62-2137 0.02 OrthoFinder output from all 47 species
Ceric.18G076800.1 Ceric.18G076800 not classified & original description: pacid=50622194... 0.02 OrthoFinder output from all 47 species
Dcu_g18808 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01006302001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01012710001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_00787 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os08g44020.2 LOC_Os08g44020 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g19716 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Len_g45652 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g36473 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10434775g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp2g13580.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp3g03160.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp5g20220.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp7g11130.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp7g11760.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g20109 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g08194 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo413794 No alias No description available 0.02 OrthoFinder output from all 47 species
Smo413798 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc04g076650.2.1 Solyc04g076650 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc05g051350.2.1 Solyc05g051350 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc11g011270.1.1 Solyc11g011270 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g04774 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e013992_P006 Zm00001e013992 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0005384 manganese ion transmembrane transporter activity IEP HCCA
BP GO:0006873 cellular monoatomic ion homeostasis IEP HCCA
BP GO:0006875 cellular metal ion homeostasis IEP HCCA
BP GO:0006952 defense response IEP HCCA
MF GO:0008061 chitin binding IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009607 response to biotic stimulus IEP HCCA
BP GO:0009617 response to bacterium IEP HCCA
BP GO:0009620 response to fungus IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
BP GO:0030003 cellular monoatomic cation homeostasis IEP HCCA
BP GO:0030026 cellular manganese ion homeostasis IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
BP GO:0042742 defense response to bacterium IEP HCCA
BP GO:0043207 response to external biotic stimulus IEP HCCA
BP GO:0044419 biological process involved in interspecies interaction between organisms IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
BP GO:0046916 cellular transition metal ion homeostasis IEP HCCA
BP GO:0048878 chemical homeostasis IEP HCCA
BP GO:0050801 monoatomic ion homeostasis IEP HCCA
BP GO:0050832 defense response to fungus IEP HCCA
BP GO:0051707 response to other organism IEP HCCA
BP GO:0055065 metal ion homeostasis IEP HCCA
BP GO:0055071 manganese ion homeostasis IEP HCCA
BP GO:0055076 transition metal ion homeostasis IEP HCCA
BP GO:0055080 monoatomic cation homeostasis IEP HCCA
BP GO:0055082 cellular chemical homeostasis IEP HCCA
BP GO:0098542 defense response to other organism IEP HCCA
BP GO:0098771 inorganic ion homeostasis IEP HCCA
InterPro domains Description Start Stop
IPR010325 Rhamnogal_lyase 48 244
IPR029411 RG-lyase_III 484 671
IPR029413 RG-lyase_II 400 467
No external refs found!