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  5. Zm00001d040379

Zm00001d040379 (GRMZM2G149605)


Aliases : GRMZM2G149605

Description : 10.7 cell wall.modification member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana. expansin A15 (EXPA15)


Gene families : OG_01_0000017 (Gene family) Phylogenetic Tree(s): OG0000017_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d040379
Cluster HCCA cluster: Cluster_76

Target Alias Description ECC score Gene Family Method Actions
AT1G12560 ATEXP7, EXPA7,... expansin A7 0.03 Gene family
AT1G62980 EXPA18, EXP18,... expansin A18 0.03 Gene family
AT4G01630 ATHEXP ALPHA... expansin A17 0.03 Gene family
AT5G02260 EXP9, EXPA9,... expansin A9 0.02 Gene family
AT5G56320 ATEXP14, EXPA14,... expansin A14 0.03 Gene family
GSVIVT01008762001 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
GSVIVT01011437001 No alias 10.7 cell wall.modification Encodes an expansin. Naming... 0.03 Gene family
GSVIVT01028215001 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
GSVIVT01028474001 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.05 Gene family
GSVIVT01029411001 No alias 10.7 cell wall.modification Encodes an expansin. Naming... 0.03 Gene family
GSVIVT01032681001 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
LOC_Os01g14650 Os01g0248900 10.7 cell wall.modification Member of Alpha-Expansin... 0.02 Gene family
LOC_Os01g14660 Os01g0249100 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
LOC_Os01g16770 Os01g0274500 10.7 cell wall.modification Encodes an expansin. Naming... 0.1 Gene family
LOC_Os02g16780 Os02g0267700 10.7 cell wall.modification member of Alpha-Expansin... 0.08 Gene family
LOC_Os02g51040 Os02g0744200 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
LOC_Os03g06000 Os03g0155300 10.7 cell wall.modification member of Alpha-Expansin... 0.12 Gene family
LOC_Os03g06010 Os03g0155500 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
LOC_Os03g06020 Os03g0155700 10.7 cell wall.modification member of Alpha-Expansin... 0.05 Gene family
LOC_Os04g15840 Os04g0228400 10.7 cell wall.modification member of Alpha-Expansin... 0.04 Gene family
LOC_Os05g19570 Os05g0276500 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
LOC_Os05g19600 Os05g0277000 10.7 cell wall.modification member of Alpha-Expansin... 0.07 Gene family
LOC_Os10g30340 Os10g0439200 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
MA_184474g0010 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
MA_86877g0010 No alias 10.7 cell wall.modification Member of Alpha-Expansin... 0.02 Gene family
MA_915221g0010 No alias 10.7 cell wall.modification Member of Alpha-Expansin... 0.03 Gene family
Smo102623 PACid_15407497 10.7 cell wall.modification member of Alpha-Expansin... 0.04 Gene family
Smo230202 PACid_15412224 10.7 cell wall.modification putative expansin. Naming... 0.02 Gene family
Smo409954 PACid_15406290 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
Smo90935 PACid_15416360 10.7 cell wall.modification Encodes an expansin. Naming... 0.02 Gene family
Solyc02g088100.3.1 Solyc02g088100.3 10.7 cell wall.modification Encodes an expansin. Naming... 0.02 Gene family
Solyc05g052245.1.1 Solyc05g052245.1 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
Solyc08g080060.3.1 Solyc08g080060.3 10.7 cell wall.modification Member of Alpha-Expansin... 0.03 Gene family
Solyc10g084780.2.1 Solyc10g084780.2 10.7 cell wall.modification member of Alpha-Expansin... 0.09 Gene family
Solyc10g086520.2.1 Solyc10g086520.2 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
Solyc12g089380.2.1 Solyc12g089380.2 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
Zm00001d016027 GRMZM2G088791 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
Zm00001d026014 GRMZM2G072121 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
Zm00001d027718 GRMZM2G073373 10.7 cell wall.modification member of Alpha-Expansin... 0.01 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 156 233
IPR009009 RlpA-like_DPBB 60 145
No external refs found!