Spa_g00755

Description : pectin methylesterase & original description: none

Gene families : OG0000083 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Spa_g00755

Target	Alias	Description	ECC score	Gene Family Method
AT1G69940	ATPPME1, PPME1	Pectin lyase-like superfamily protein	0.02	OrthoFinder output from all 47 species
AT2G36710	No alias	Pectin lyase-like superfamily protein	0.03	OrthoFinder output from all 47 species
Aev_g17009	No alias	pectin methylesterase & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g16581	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g02507	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene01890.t1	Aspi01Gene01890	pectin methylesterase & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene30602.t1	Aspi01Gene30602	pectin methylesterase & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0103.g044651	No alias	pectin methylesterase & original description: CDS=1-1083	0.02	OrthoFinder output from all 47 species
Ceric.03G008900.1	Ceric.03G008900	pectin methylesterase & original description:...	0.02	OrthoFinder output from all 47 species
Ceric.10G069000.1	Ceric.10G069000	pectin methylesterase & original description:...	0.06	OrthoFinder output from all 47 species
Ceric.37G019300.1	Ceric.37G019300	pectin methylesterase & original description:...	0.03	OrthoFinder output from all 47 species
Dcu_g51672	No alias	pectin methylesterase & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g26229	No alias	pectin methylesterase & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01031250001	No alias	Cell wall.pectin.homogalacturonan.modification and...	0.03	OrthoFinder output from all 47 species
Gb_17798	No alias	pectin methylesterase	0.04	OrthoFinder output from all 47 species
Gb_41519	No alias	pectin methylesterase	0.03	OrthoFinder output from all 47 species
LOC_Os05g44600.1	LOC_Os05g44600	pectin methylesterase	0.03	OrthoFinder output from all 47 species
LOC_Os09g39760.1	LOC_Os09g39760	pectin methylesterase	0.03	OrthoFinder output from all 47 species
Len_g53837	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
MA_19196g0010	ATPE11, PE11	pectin methylesterase	0.02	OrthoFinder output from all 47 species
MA_6149868g0010	No alias	pectin methylesterase	0.03	OrthoFinder output from all 47 species
Msp_g44845	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g39408	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Pp3c16_6660V3.1	Pp3c16_6660	Pectin lyase-like superfamily protein	0.01	OrthoFinder output from all 47 species
Solyc04g080530.3.1	ATPE11, PE11,...	pectin methylesterase	0.03	OrthoFinder output from all 47 species
Spa_g37234	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0030599	pectinesterase activity	IEA	Interproscan
BP	GO:0042545	cell wall modification	IEA	Interproscan
BP	GO:0045229	external encapsulating structure organization	None	Extended
MF	GO:0052689	carboxylic ester hydrolase activity	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001510	RNA methylation	IEP	HCCA
MF	GO:0004672	protein kinase activity	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006396	RNA processing	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	HCCA
BP	GO:0006807	nitrogen compound metabolic process	IEP	HCCA
BP	GO:0008152	metabolic process	IEP	HCCA
MF	GO:0008168	methyltransferase activity	IEP	HCCA
BP	GO:0009451	RNA modification	IEP	HCCA
BP	GO:0009452	7-methylguanosine RNA capping	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	HCCA
BP	GO:0032259	methylation	IEP	HCCA
BP	GO:0036260	RNA capping	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
BP	GO:0043414	macromolecule methylation	IEP	HCCA
BP	GO:0044237	cellular metabolic process	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
BP	GO:0046483	heterocycle metabolic process	IEP	HCCA
BP	GO:0071704	organic substance metabolic process	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
BP	GO:1901360	organic cyclic compound metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000070	Pectinesterase_cat	105	385

External Links

No external refs found!

Spa_g00755

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation