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  5. Spa_g00713

Spa_g00713 (SNX1, ATSNX1)


Aliases : SNX1, ATSNX1

Description : regulatory factor SNX1 of Retromer protein recycling complex & original description: none


Gene families : OG0003446 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003446_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g00713

Target Alias Description ECC score Gene Family Method Actions
Adi_g105073 SNX1, ATSNX1 regulatory factor SNX1 of Retromer protein recycling... 0.03 OrthoFinder output from all 47 species
Aob_g05057 SNX1, ATSNX1 regulatory factor SNX1 of Retromer protein recycling... 0.03 OrthoFinder output from all 47 species
Aop_g12488 SNX1, ATSNX1 regulatory factor SNX1 of Retromer protein recycling... 0.03 OrthoFinder output from all 47 species
Aop_g70692 SNX1, ATSNX1 regulatory factor SNX1 of Retromer protein recycling... 0.01 OrthoFinder output from all 47 species
Cba_g04481 SNX1, ATSNX1 regulatory factor SNX1 of Retromer protein recycling... 0.03 OrthoFinder output from all 47 species
Cre06.g281050 SNX1, ATSNX1 Vesicle trafficking.endomembrane trafficking.protein... 0.02 OrthoFinder output from all 47 species
Mp7g16810.1 SNX1, ATSNX1 component SNX1 of Retromer protein recycling complex 0.02 OrthoFinder output from all 47 species
Nbi_g06128 SNX1, ATSNX1 regulatory factor SNX1 of Retromer protein recycling... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0035091 phosphatidylinositol binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP HCCA
MF GO:0003684 damaged DNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006289 nucleotide-excision repair IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0010498 proteasomal protein catabolic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0032780 negative regulation of ATP-dependent activity IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0042030 ATPase inhibitor activity IEP HCCA
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0043462 regulation of ATP-dependent activity IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044092 negative regulation of molecular function IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001683 PX_dom 56 133
IPR015404 Vps5_C 162 392
No external refs found!