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  5. Spa_g00411

Spa_g00411 (ATRD22, RD22)


Aliases : ATRD22, RD22

Description : not classified & original description: none


Gene families : OG0000218 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000218_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g00411
Cluster HCCA: Cluster_82

Target Alias Description ECC score Gene Family Method Actions
Aev_g19336 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34468.t1 ATRD22, RD22,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34471.t1 ATRD22, RD22,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34476.t1 ATRD22, RD22,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34479.t1 ATRD22, RD22,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g09864 ATRD22, RD22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g10463 ATRD22, RD22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g13160 PG1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g09355 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g37163 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g55574 PG2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g55608 ATRD22, RD22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c12_6690V3.1 Pp3c12_6690 polygalacturonase 1 0.01 OrthoFinder output from all 47 species
Pp3c4_21630V3.1 Pp3c4_21630 polygalacturonase 1 0.01 OrthoFinder output from all 47 species
Tin_g19046 ATRD22, RD22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g20830 ATRD22, RD22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g39166 JP630, PG3 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR004873 BURP_dom 142 366
No external refs found!