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  5. Zm00001d040222

Zm00001d040222 (GRMZM2G411786)


Aliases : GRMZM2G411786

Description : No description available


Gene families : OG_01_0000001 (Gene family) Phylogenetic Tree(s): OG0000001_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d040222

Target Alias Description ECC score Gene Family Method Actions
AT1G17630 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.02 Gene family
AT2G39620 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Gene family
AT3G03580 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Gene family
AT4G39530 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Gene family
GSVIVT01010031001 No alias No description available 0.05 Gene family
GSVIVT01017880001 No alias No description available 0.08 Gene family
GSVIVT01020758001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
LOC_Os01g01115 Os01g0101150 No description available 0.02 Gene family
LOC_Os01g59890 Os01g0814300 35.2 not assigned.unknown Tetratricopeptide repeat... 0.05 Gene family
LOC_Os01g60250 Os01g0818200 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
LOC_Os04g35650 Os04g0436800 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
LOC_Os05g05490 Os05g0147600 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
LOC_Os05g30710 Os05g0370000 No description available 0.05 Gene family
LOC_Os07g05560 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
LOC_Os08g33700 Os08g0434000 No description available 0.04 Gene family
LOC_Os08g38610 Os08g0494200,... No description available 0.02 Gene family
LOC_Os08g40020 Os08g0511000 No description available 0.05 Gene family
LOC_Os11g45410 Os11g0679900,... 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
MA_10429837g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
MA_210823g0010 No alias No description available 0.06 Gene family
MA_2991g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
MA_34492g0020 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
MA_59148g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
MA_65500g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Solyc01g080190.3.1 Solyc01g080190.3 No description available 0.02 Gene family
Solyc03g007840.1.1 Solyc03g007840.1 35.1.27 not assigned.no ontology.tetratricopeptide... 0.03 Gene family
Solyc03g116000.1.1 Solyc03g116000.1 No description available 0.02 Gene family
Solyc04g076330.2.1 Solyc04g076330.2 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
Solyc08g078570.2.1 Solyc08g078570.2 No description available 0.03 Gene family
Solyc11g010220.2.1 Solyc11g010220.2 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.06 Gene family

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR032867 DYW_dom 713 836
IPR002885 Pentatricopeptide_repeat 236 280
IPR002885 Pentatricopeptide_repeat 439 483
IPR002885 Pentatricopeptide_repeat 538 585
IPR002885 Pentatricopeptide_repeat 311 336
IPR002885 Pentatricopeptide_repeat 412 431
IPR002885 Pentatricopeptide_repeat 339 366
IPR002885 Pentatricopeptide_repeat 613 637
IPR002885 Pentatricopeptide_repeat 207 234
IPR002885 Pentatricopeptide_repeat 679 708
No external refs found!