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  5. Ore_g45290

Ore_g45290


Description : Fibrillin plastoglobule core protein *(FBN1/2) & original description: none


Gene families : OG0002240 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002240_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g45290
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00085290 evm_27.TU.AmTr_v1... Plastid lipid-associated protein 3, chloroplastic... 0.04 OrthoFinder output from all 47 species
AT4G04020 FIB fibrillin 0.03 OrthoFinder output from all 47 species
Adi_g113977 FIB Fibrillin plastoglobule core protein *(FBN1/2) &... 0.03 OrthoFinder output from all 47 species
Aev_g10976 No alias Fibrillin plastoglobule core protein *(FBN1/2) &... 0.06 OrthoFinder output from all 47 species
Aev_g39447 No alias Fibrillin plastoglobule core protein *(FBN1/2) &... 0.03 OrthoFinder output from all 47 species
Als_g02332 FIB Fibrillin plastoglobule core protein *(FBN1/2) &... 0.06 OrthoFinder output from all 47 species
Aob_g19138 No alias Fibrillin plastoglobule core protein *(FBN1/2) &... 0.07 OrthoFinder output from all 47 species
Azfi_s0001.g000159 No alias Fibrillin plastoglobule core protein *(FBN1/2) &... 0.04 OrthoFinder output from all 47 species
Cba_g01687 FIB Fibrillin plastoglobule core protein *(FBN1/2) &... 0.07 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020943.18 No alias Plastoglobulin-1, chloroplastic OS=Pisum sativum 0.02 OrthoFinder output from all 47 species
Cre03.g189300 FIB Plastid lipid-associated protein 2, chloroplastic... 0.02 OrthoFinder output from all 47 species
Dac_g17027 FIB Fibrillin plastoglobule core protein *(FBN1/2) &... 0.04 OrthoFinder output from all 47 species
Dde_g12841 FIB Fibrillin plastoglobule core protein *(FBN1/2) &... 0.04 OrthoFinder output from all 47 species
Ehy_g08272 FIB Fibrillin plastoglobule core protein *(FBN1/2) &... 0.03 OrthoFinder output from all 47 species
Ehy_g24089 No alias Fibrillin plastoglobule core protein *(FBN8) & original... 0.09 OrthoFinder output from all 47 species
GSVIVT01013072001 No alias Probable plastid-lipid-associated protein 3,... 0.02 OrthoFinder output from all 47 species
LOC_Os09g04790.1 LOC_Os09g04790 Probable plastid-lipid-associated protein 2,... 0.04 OrthoFinder output from all 47 species
LOC_Os10g42500.1 LOC_Os10g42500 Probable plastid-lipid-associated protein 3,... 0.05 OrthoFinder output from all 47 species
Len_g14962 FIB Fibrillin plastoglobule core protein *(FBN1/2) &... 0.02 OrthoFinder output from all 47 species
MA_10031049g0010 No alias Probable plastid-lipid-associated protein 3,... 0.02 OrthoFinder output from all 47 species
MA_153977g0010 No alias Plastid-lipid-associated protein, chloroplastic... 0.04 OrthoFinder output from all 47 species
MA_28715g0010 No alias Light-induced protein, chloroplastic OS=Solanum... 0.02 OrthoFinder output from all 47 species
Pir_g18705 FIB Fibrillin plastoglobule core protein *(FBN1/2) &... 0.03 OrthoFinder output from all 47 species
Ppi_g09162 FIB Fibrillin plastoglobule core protein *(FBN1/2) &... 0.08 OrthoFinder output from all 47 species
Solyc08g005220.4.1 Solyc08g005220 Probable plastid-lipid-associated protein 3,... 0.02 OrthoFinder output from all 47 species
Spa_g08959 FIB Fibrillin plastoglobule core protein *(FBN1/2) &... 0.02 OrthoFinder output from all 47 species
Spa_g25315 FIB Fibrillin plastoglobule core protein *(FBN1/2) &... 0.03 OrthoFinder output from all 47 species
Spa_g25316 FIB Fibrillin plastoglobule core protein *(FBN1/2) &... 0.02 OrthoFinder output from all 47 species
Tin_g21553 FIB Fibrillin plastoglobule core protein *(FBN1/2) &... 0.07 OrthoFinder output from all 47 species
Zm00001e002454_P001 Zm00001e002454 Probable plastid-lipid-associated protein 3,... 0.05 OrthoFinder output from all 47 species
Zm00001e007939_P001 Zm00001e007939 Probable plastid-lipid-associated protein 2,... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
MF GO:0009916 alternative oxidase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
BP GO:0110102 ribulose bisphosphate carboxylase complex assembly IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR006843 PAP/fibrillin_dom 149 363
No external refs found!