Ore_g45205

Description : not classified & original description: none

Gene families : OG0000706 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000706_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ore_g45205

Target	Alias	Description	ECC score	Gene Family Method
Ore_g01283	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g02372	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Ore_g02969	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g03946	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g04025	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g05589	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g08152	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g11398	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Ore_g11551	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Ore_g20313	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g22464	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g25639	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g28675	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g29345	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Ore_g29676	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g29978	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g32456	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Ore_g32633	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Ore_g33170	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g33557	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g33975	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Ore_g35237	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Ore_g35237	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Ore_g35619	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Ore_g37210	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g37492	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Ore_g38947	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g41209	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species

ECC Pair graph <h3 class="banner-blue" id="annotation"> Functional Annotation</h3><div class="panel with-nav-tabs panel-default"><div class="panel-heading"><ul class="nav nav-tabs"><li class="active"><a href="#tab1default" data-toggle="tab">GO</a></li><li><a href="#tab2default" data-toggle="tab">Predicted GO</a></li><li><a href="#tab3default" data-toggle="tab">InterPro</a></li></ul></div><div><div class="tab-content"><div class="tab-pane fade in active" id="tab1default"><div class="table-responsive"><table class="table table-striped table-fixed" id="go_table"><thead><tr><th class="col-xs-1" data-sort="string-ins"><span class="sort-icon"></span>Type</th><th class="col-xs-2" data-sort="string-ins"><span class="sort-icon"></span><abbr title="Click to show help" href="/help/go" data-target="#helpModal">GO</abbr> Term</th><th class="col-xs-6" data-sort="string-ins"><span class="sort-icon"></span>Name</th><th class="col-xs-1" data-sort="string-ins"><span class="sort-icon"></span>Evidence</th><th class="col-xs-2" data-sort="string-ins"><span class="sort-icon"></span>Source</th></tr></thead><tbody><tr><td class="col-xs-12"><p>No GO annotation available for this sequence</p></td></tr></tbody></table></div><div class="panel-body"><a href="#" id="go_toggle">Toggle parental</a></div></div><div class="tab-pane fade" id="tab2default"><div class="table-responsive"><table class="table table-striped table-fixed" id="predicted_go_table"><thead><tr><th class="col-xs-1" data-sort="string-ins"><span class="sort-icon"></span>Type</th><th class="col-xs-2" data-sort="string-ins"><span class="sort-icon"></span><abbr title="Click to show help" href="/help/go" data-target="#helpModal">GO</abbr> Term</th><th class="col-xs-6" data-sort="string-ins"><span class="sort-icon"></span>Name</th><th class="col-xs-1" data-sort="string-ins"><span class="sort-icon"></span>Evidence</th><th class="col-xs-2" data-sort="string-ins"><span class="sort-icon"></span>Source</th></tr></thead><tbody><tr style="clear:both;"><td class="col-xs-1">MF</td><td class="col-xs-2"><a href="/go/view/2687" data-toggle="tooltip" data-placement="top" title=""Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0)." [EC:5.2.1.8]">GO:0003755</a></td><td class="col-xs-6">peptidyl-prolyl cis-trans isomerase activity</td><td class="col-xs-1">IEP</td><td class="col-xs-2">HCCA</td></tr><tr style="clear:both;"><td class="col-xs-1">MF</td><td class="col-xs-2"><a href="/go/view/10572" data-toggle="tooltip" data-placement="top" title=""Catalysis of a reaction that interconverts cis and trans isomers. Atoms or groups are termed cis or trans to one another when they lie respectively on the same or on opposite sides of a reference plane identifiable as common among stereoisomers." [GOC:mah, ISBN:0198506732]">GO:0016859</a></td><td class="col-xs-6">cis-trans isomerase activity</td><td class="col-xs-1">IEP</td><td class="col-xs-2">HCCA</td></tr></tbody></table></div></div><div class="tab-pane fade" id="tab3default"><div class="panel-body"><p>No InterPro domains available for this sequence</p></div></div></div></div></div><div class="row"><div class="col-lg-12 col-md-12 col-sm-12"><div class="panel panel-default"><div class="panel-heading" id="links">External Links</div><div class="table-responsive"><table class="table table-striped table-separated"><tbody><tr><td><em>No external refs found!</em></td></td></tr></tbody></table></div></div></div></div><div class="modal" id="profileModal" tabindex="-1" role="dialog" aria-labelledby="profileModalLabel"><div class="modal-dialog" role="document" style="width:1000px;height:800px;"><div class="modal-content"></div></div></div></div></div></div><footer class="footer" id="footer"><div class="container"><div class="row"><div class="col-xs-2"><strong class="text-muted"><a href="/features" class="text-muted">CoNekT</a></strong></div><div class="col-xs-2"><a href="/about" class="text-muted">About</a></div><div class="col-xs-2"><a href="/contact" class="text-muted">Contact</a></div><div class="col-xs-2"><a href="/disclaimer" class="text-muted">Disclaimer</a></div><div class="col-xs-2"><a href="/privacy" class="text-muted">Privacy policy</a></div></div></div></footer><div class="modal" id="helpModal" tabindex="-1" role="dialog" aria-labelledby="helpModalLabel"><div class="modal-dialog" role="document" style="width:1000px;height:800px;"><div class="modal-content"></div></div></div><div class="modal" id="loaderModal" tabindex="-1" role="dialog" aria-labelledby="loaderModalLabel"><div class="modal-dialog" role="document" style="width:1000px;height:800px;"><div class="modal-content"><div class="modal-body"><div id="leafy_loader"></div><p class="text-center text-muted" id="leafy_loader_text">Loading ... please wait ...</p><p class="text-center" id="leafy_loader_close_btn" style="display:none"><button type="button" class="btn btn-primary" data-dismiss="modal" style> Close</button></p></div></div></div></div><script src="/static/js/jquery.min.js"></script><script src="/static/js/bootstrap.min.js"></script><script src="/static/js/stupidtable.min.js"></script><script src="/static/js/TweenMax.min.js"></script><script src="/static/js/jquery.qtip.min.js"></script><script src="/static/js/planet_loader.js"></script><script> function init_qtip() { $('.qtip_tooltip').each(function() { $(this).qtip({ content: { text: function(event, api) { $.ajax({ url: api.elements.target.attr('qtip_href') }) .then(function(content) { // Set the tooltip content upon successful retrieval api.set('content.text', content); }, function(xhr, status, error) { // Upon failure... set the tooltip content to error api.set('content.text', status + ': ' + error); }); return 'Loading...'; // Set some initial text } }, show: { effect: function() { $(this).fadeTo(500, 1); } }, hide: { effect: function() { $(this).fadeTo(500, 0); } }, position: { viewport: $(window) }, style: 'qtip-bootstrap' }); }); } $(function () { init_qtip(); $("#leafy_loader").html(get_loader_svg('loader_leafy')); init_planet_loader('loader_leafy'); $('[data-toggle="popover"]').popover({container: 'body'}); $('a[data-target=#helpModal], abbr[data-target=#helpModal]').click(function(ev) { ev.preventDefault(); var target = $(this).attr("href"); // load the url and show modal on success $("#helpModal .modal-content").load(target, function() { $("#helpModal").modal("show"); }); }); }); </script><script src="/static/js/planet_pagination.js"></script><script src="/static/js/planet_ajax_table.js"></script><script type="text/javascript"> var csrf_token = "ImY5YmFiNDQ2MWUxNWZiOWRlMjhjYzUyOGQ4NWM3ZGY0N2UyMmJhMjQi.GmPe-w.6_i3IJnEV2fbRz0SS7C6hSjTf38"; $.ajaxSetup({ beforeSend: function(xhr, settings) { if (!/^(GET|HEAD|OPTIONS|TRACE)$/i.test(settings.type) && !this.crossDomain) { xhr.setRequestHeader("X-CSRFToken", csrf_token); } } }); </script><script src="/static/js/Chart.min.js"></script><script src="/static/js/hammer.min.js"></script><script src="/static/js/chartjs-plugin-zoom.min.js"></script><script> $(function () { $("#go_table").stupidtable(); $("#predicted_go_table").stupidtable(); $("#interpro_table").stupidtable(); $("#ecc_hits_table").stupidtable(); $("#coexpression_table").stupidtable(); $('[data-toggle="tooltip"]').tooltip(); $('a[data-target=#profileModal]').click(function(ev) { ev.preventDefault(); var target = $(this).attr("href"); // load the url and show modal on success $("#profileModal .modal-content").load(target, function() { $("#profileModal").modal("show"); }); }); $("#go_toggle").click(function(ev) { ev.preventDefault(); $(".parent_term").toggle(); }); $("#navbar-side a").on('click', function(event) { // Make sure this.hash has a value before overriding default behavior if (this.hash !== "") { // Prevent default anchor click behavior event.preventDefault(); // Store hash var hash = this.hash; // Using jQuery's animate() method to add smooth page scroll // The optional number (800) specifies the number of milliseconds it takes to scroll to the specified area $('html, body').animate({ scrollTop: $(hash).offset().top - 55 }, 800, function(){ // Add hash (#) to URL when done scrolling (default click behavior) window.location.hash = hash; }); } // End if }); }) $( document ).ready(function() { $.getJSON( "/profile/json/plot/1932349", function( data ) { var ctx = document.getElementById("expression-profile").getContext("2d"); data['options']['responsive'] = true; data['options']['maintainAspectRatio'] = false; data['options']['tooltips'] = { enabled: true, mode: 'label', itemSort: function(a, b, data) { conversion = {'Minimum': 0, 'Mean - Stdev':0, 'Mean': 1, 'Maximum': 2, 'Mean + Stdev': 2} if (conversion[data.datasets[a.datasetIndex].label] > conversion[data.datasets[b.datasetIndex].label]) { return -1 } else if (conversion[data.datasets[a.datasetIndex].label] < conversion[data.datasets[b.datasetIndex].label]) { return 1 } else { return 0 } }, callbacks: { afterTitle: function(tooltipItems, data) { if (data.counts[tooltipItems[0].index] == null) { return null; 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Ore_g45205

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)