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  5. Ore_g45086

Ore_g45086


Description : C2H2 subclass ZFP transcription factor & original description: none


Gene families : OG0000096 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000096_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g45086
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00165560 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 OrthoFinder output from all 47 species
AMTR_s00124p00105750 KNU,... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 OrthoFinder output from all 47 species
AMTR_s00138p00067840 ZFP7,... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 OrthoFinder output from all 47 species
AMTR_s00150p00049910 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
Adi_g033743 RAB, RBE C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Adi_g079264 ZFP1, ATZFP1 C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ala_g22523 KNU C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aob_g12668 No alias C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dac_g02189 No alias C2H2 subclass ZFP transcription factor & original... 0.03 OrthoFinder output from all 47 species
LOC_Os03g41110.1 ZFP7, LOC_Os03g41110 C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
LOC_Os07g40300.1 ZFP7, LOC_Os07g40300 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Len_g10074 ZFP10, ATZFP10 C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
MA_10430024g0010 No alias C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
MA_357706g0010 ZFP10, ATZFP10 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Ppi_g59122 ZFP5 C2H2 subclass ZFP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Zm00001e013379_P001 ZFP11, ATZFP11,... C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e034293_P001 ZFP8, Zm00001e034293 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
CC GO:0005778 peroxisomal membrane IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016559 peroxisome fission IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031903 microbody membrane IEP HCCA
MF GO:0035673 oligopeptide transmembrane transporter activity IEP HCCA
CC GO:0042579 microbody IEP HCCA
MF GO:0042887 amide transmembrane transporter activity IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0048285 organelle fission IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
MF GO:1904680 peptide transmembrane transporter activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!