Description : component *(NOT2) of mRNA deadenylation CCR4-NOT complex & original description: none
Gene families : OG0002132 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002132_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Aspi01Gene38795.t1 | Aspi01Gene38795 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g06443 | No alias | component *(NOT2) of mRNA deadenylation CCR4-NOT complex... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os05g40790.1 | VIP2, AtVIP2,... | component NOT2 of mRNA deadenylation CCR4-NOT complex | 0.02 | OrthoFinder output from all 47 species | |
Mp1g21150.1 | No alias | component NOT2 of mRNA deadenylation CCR4-NOT complex | 0.02 | OrthoFinder output from all 47 species | |
Nbi_g08612 | No alias | component *(NOT2) of mRNA deadenylation CCR4-NOT complex... | 0.02 | OrthoFinder output from all 47 species | |
Sam_g06699 | No alias | component *(NOT2) of mRNA deadenylation CCR4-NOT complex... | 0.02 | OrthoFinder output from all 47 species | |
Spa_g46561 | No alias | component *(NOT2) of mRNA deadenylation CCR4-NOT complex... | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006355 | regulation of DNA-templated transcription | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
CC | GO:0005634 | nucleus | IEP | HCCA |
MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0036094 | small molecule binding | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR007282 | NOT2/3/5_C | 534 | 654 |
No external refs found! |