Aliases : APUM12, PUM12
Description : not classified & original description: none
Gene families : OG0000858 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000858_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00060p00178160 | PUM7, APUM7,... | Putative pumilio homolog 7, chloroplastic OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
Adi_g058334 | APUM12, PUM12 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene23704.t1 | APUM12, PUM12,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene37289.t1 | APUM12, PUM12,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s0040.g026500 | APUM12, PUM12 | not classified & original description: CDS=1-2874 | 0.02 | OrthoFinder output from all 47 species | |
Len_g13938 | PUM7, APUM7 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008270 | zinc ion binding | IEP | HCCA |
MF | GO:0016409 | palmitoyltransferase activity | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
MF | GO:0043169 | cation binding | IEP | HCCA |
MF | GO:0046872 | metal ion binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000571 | Znf_CCCH | 486 | 506 |
IPR001313 | Pumilio_RNA-bd_rpt | 885 | 904 |
IPR001313 | Pumilio_RNA-bd_rpt | 625 | 658 |
IPR001313 | Pumilio_RNA-bd_rpt | 809 | 826 |
IPR001313 | Pumilio_RNA-bd_rpt | 660 | 693 |
IPR001313 | Pumilio_RNA-bd_rpt | 698 | 730 |
IPR001313 | Pumilio_RNA-bd_rpt | 736 | 766 |
IPR001313 | Pumilio_RNA-bd_rpt | 844 | 877 |
IPR001313 | Pumilio_RNA-bd_rpt | 771 | 804 |
No external refs found! |