Ore_g44884 (HTA6)

Aliases : HTA6

Description : histone *(H2A) & original description: none

Gene families : OG0000117 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000117_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ore_g44884
Cluster	HCCA: Cluster_104

Target	Alias	Description	ECC score	Gene Family Method
Aspi01Gene10197.t1	RAT5, HTA1,...	histone *(H2A) & original description: none	0.01	OrthoFinder output from all 47 species
GSVIVT01002735001	RAT5, HTA1, ATHTA1	Chromatin organisation.histones.H2A-type histone	0.01	OrthoFinder output from all 47 species
Len_g03532	GAMMA-H2AX,...	histone *(H2A) & original description: none	0.01	OrthoFinder output from all 47 species
Len_g05644	RAT5, HTA1, ATHTA1	histone *(H2A) & original description: none	0.01	OrthoFinder output from all 47 species
Len_g14652	GAMMA-H2AX,...	histone *(H2A) & original description: none	0.02	OrthoFinder output from all 47 species
Len_g55104	HTA6	histone *(H2A) & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g08323	HTA6	histone *(H2A) & original description: none	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0008270	zinc ion binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR032454	Histone_H2A_C	114	144
IPR007125	Histone_H2A/H2B/H3	29	111

External Links

No external refs found!