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  5. Ore_g44868

Ore_g44868 (TGH)


Aliases : TGH

Description : component *(TOUGH) of DCL1-HYL1 miRNA biogenesis complex & original description: none


Gene families : OG0004570 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004570_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g44868

Target Alias Description ECC score Gene Family Method Actions
Aop_g20730 TGH component *(TOUGH) of DCL1-HYL1 miRNA biogenesis complex... 0.02 OrthoFinder output from all 47 species
Dac_g20945 TGH component *(TOUGH) of DCL1-HYL1 miRNA biogenesis complex... 0.03 OrthoFinder output from all 47 species
Dcu_g15206 TGH component *(TOUGH) of DCL1-HYL1 miRNA biogenesis complex... 0.04 OrthoFinder output from all 47 species
Lfl_g10031 TGH component *(TOUGH) of DCL1-HYL1 miRNA biogenesis complex... 0.03 OrthoFinder output from all 47 species
Mp1g06200.1 TGH component TOUGH of DCL1-HYL1 miRNA biogenesis complex 0.02 OrthoFinder output from all 47 species
Smo80512 TGH RNA biosynthesis.RNA polymerase II-dependent... 0.03 OrthoFinder output from all 47 species
Spa_g12253 TGH component *(TOUGH) of DCL1-HYL1 miRNA biogenesis complex... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005985 sucrose metabolic process IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
MF GO:0016157 sucrose synthase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR011666 DUF1604 42 122
IPR000061 Surp 424 473
IPR000467 G_patch_dom 163 185
No external refs found!