Ore_g44844 (ZFN1)

Aliases : ZFN1

Description : regulatory protein of RNA homeostasis & original description: none

Gene families : OG0000297 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000297_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ore_g44844
Cluster	HCCA: Cluster_20

Target	Alias	Description	ECC score	Gene Family Method
AT3G06410	No alias	Zinc finger C-x8-C-x5-C-x3-H type family protein	0.02	OrthoFinder output from all 47 species
GSVIVT01007563001	No alias	RNA biosynthesis.transcriptional activation.C3H zinc...	0.04	OrthoFinder output from all 47 species
LOC_Os12g18120.1	LOC_Os12g18120	C3H zinc finger transcription factor	0.03	OrthoFinder output from all 47 species
Pir_g52609	No alias	regulatory protein of RNA homeostasis & original...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	IEA	Interproscan

Type	GO Term	Name	Evidence	Source
MF	GO:0003682	chromatin binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000571	Znf_CCCH	309	334
IPR000571	Znf_CCCH	113	137
IPR000571	Znf_CCCH	67	92
IPR000571	Znf_CCCH	355	379
IPR000571	Znf_CCCH	161	185

External Links

No external refs found!