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  5. Ore_g44544

Ore_g44544


Description : E3 ubiquitin ligase *(RMA/MUSE) & original description: none


Gene families : OG0000266 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000266_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g44544
Cluster HCCA: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00165910 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Adi_g024920 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g07901 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0274.g061363 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description:... 0.05 OrthoFinder output from all 47 species
Azfi_s1126.g097855 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description: CDS=1-693 0.03 OrthoFinder output from all 47 species
Ceric.39G049500.1 Ceric.39G049500 E3 ubiquitin ligase *(RMA/MUSE) & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g40137 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description: none 0.08 OrthoFinder output from all 47 species
Dde_g48203 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01031912001 No alias No description available 0.07 OrthoFinder output from all 47 species
Mp8g08340.1 No alias RING-HC-class E3 ligase 0.03 OrthoFinder output from all 47 species
Msp_g00333 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g62388 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc12g010670.1.1 RMA3, ATRMA3,... RING-HC-class E3 ligase 0.04 OrthoFinder output from all 47 species
Spa_g29641 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g41039 No alias E3 ubiquitin ligase *(RMA/MUSE) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e028986_P001 Zm00001e028986 RING-HC-class E3 ligase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
InterPro domains Description Start Stop
IPR018957 Znf_C3HC4_RING-type 73 113
No external refs found!