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  5. Ore_g44500

Ore_g44500 (EMB2729, BE1)


Aliases : EMB2729, BE1

Description : EC_2.4 glycosyltransferase & original description: none


Gene families : OG0001102 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001102_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g44500
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00188540 SBE2.2,... Carbohydrate metabolism.starch... 0.03 OrthoFinder output from all 47 species
AMTR_s00055p00224220 EMB2729, BE1,... Carbohydrate metabolism.starch... 0.05 OrthoFinder output from all 47 species
AT3G20440 EMB2729, BE1 Alpha amylase family protein 0.02 OrthoFinder output from all 47 species
Als_g31856 EMB2729, BE1 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g05750 EMB2729, BE1 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s3330.g115373 SBE2.2 starch branching enzyme & original description: CDS=1-1083 0.03 OrthoFinder output from all 47 species
Cba_g01260 SBE2.2 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g18095 EMB2729, BE1 EC_2.4 glycosyltransferase & original description: none 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021432.19 SBE2.2 Carbohydrate metabolism.starch... 0.02 OrthoFinder output from all 47 species
Dcu_g07721 EMB2729, BE1 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08904 SBE2.2 EC_2.4 glycosyltransferase & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g04438 EMB2729, BE1 EC_2.4 glycosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01037695001 EMB2729, BE1 Carbohydrate metabolism.starch... 0.02 OrthoFinder output from all 47 species
Gb_38481 EMB2729, BE1 starch branching enzyme 0.03 OrthoFinder output from all 47 species
Msp_g24621 EMB2729, BE1 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g08439 EMB2729, BE1 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g32971 EMB2729, BE1 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03209 SBE2.2 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002607 SBE2.1, BE3 EC_2.4 glycosyltransferase & original description: CDS=145-2544 0.02 OrthoFinder output from all 47 species
Sam_g16543 No alias EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g19444 No alias starch branching enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Solyc07g064830.3.1 EMB2729, BE1,... starch branching enzyme 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
MF GO:0043169 cation binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR004193 Glyco_hydro_13_N 142 204
IPR006047 Glyco_hydro_13_cat_dom 444 545
IPR006048 A-amylase/branching_C 829 916
No external refs found!