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  5. Ore_g44449

Ore_g44449


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g44449

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00176600 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Adi_g005619 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g008833 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g47343 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g38563 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07029 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26666 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30888 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g55226 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g58582 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29976 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g34918 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g35091 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g76621 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001657.6 No alias No description available 0.01 OrthoFinder output from all 47 species
Cre12.g483700 OSB4 Cell cycle.organelle machineries.DNA... 0.02 OrthoFinder output from all 47 species
Dac_g37875 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g45106 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g36959 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g47902 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os12g30620.1 LOC_Os12g30620 Pentatricopeptide repeat-containing protein At3g29230... 0.02 OrthoFinder output from all 47 species
Len_g26951 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g54970 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g41100 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g41382 SLO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g20499 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g01775 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g02832 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g03029 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g05130 OTP82 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g05347 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g12690 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g12878 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g12881 RARE1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g13275 OTP82 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g14064 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g18087 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g19780 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g22972 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g36479 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g36668 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g40875 OTP82 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g41140 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g42021 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g44325 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g04536 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g12101 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g23117 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26544 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26639 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e015358_P001 Zm00001e015358 Pentatricopeptide repeat-containing protein At5g39350... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006396 RNA processing IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
InterPro domains Description Start Stop
IPR032867 DYW_dom 9 100
No external refs found!