Ore_g44415 (PUB26)

Aliases : PUB26

Description : U-Box-group-III E3 ubiquitin ligase & original description: none

Gene families : OG0000127 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000127_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ore_g44415

Target	Alias	Description	ECC score	Gene Family Method
AT3G52450	PUB22	plant U-box 22	0.04	OrthoFinder output from all 47 species
AT5G65920	No alias	ARM repeat superfamily protein	0.03	OrthoFinder output from all 47 species
Adi_g003285	PUB25	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g054744	PUB25	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g077174	PUB25	U-Box-group-III E3 ubiquitin ligase & original description: none	0.04	OrthoFinder output from all 47 species
Als_g12714	PUB25	U-Box-group-III E3 ubiquitin ligase & original description: none	0.04	OrthoFinder output from all 47 species
Als_g12715	PUB25	U-Box-group-III E3 ubiquitin ligase & original description: none	0.02	OrthoFinder output from all 47 species
Als_g23185	CMPG1, ATCMPG1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g60936	PUB25	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Als_g61569	PUB26	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene33499.t1	PUB25, Aspi01Gene33499	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene44311.t1	PUB22, Aspi01Gene44311	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ceric.1Z056500.1	PUB26, Ceric.1Z056500	U-Box-group-III E3 ubiquitin ligase & original...	0.04	OrthoFinder output from all 47 species
Ceric.27G047700.1	PUB8, B80,...	E3 ubiquitin ligase *(PUB8) & original description:...	0.04	OrthoFinder output from all 47 species
Dcu_g01521	PUB8, B80	E3 ubiquitin ligase *(PUB8) & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g22421	PUB26	U-Box-group-III E3 ubiquitin ligase & original description: none	0.05	OrthoFinder output from all 47 species
Dcu_g26825	PUB26	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g03660	PUB23	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g11880	CMPG1, ATCMPG1	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g16036	PUB26	U-Box-group-III E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01011139001	PUB23	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
GSVIVT01011140001	PUB23	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
GSVIVT01026769001	PUB22	E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
Gb_19502	PUB23	U-box domain-containing protein 25 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
LOC_Os01g64570.1	PUB23, LOC_Os01g64570	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
LOC_Os02g34410.1	PUB25, LOC_Os02g34410	U-box domain-containing protein 25 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
LOC_Os03g13740.1	LOC_Os03g13740	U-box domain-containing protein 20 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Len_g09678	PUB25	E3 ubiquitin ligase & original description: none	0.04	OrthoFinder output from all 47 species
Len_g57183	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
MA_10433846g0010	PUB23	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
MA_6335g0010	CMPG2, ATCMPG2	E3 ubiquitin ligase (PUB)	0.03	OrthoFinder output from all 47 species
MA_8837995g0010	PUB26	U-box domain-containing protein 26 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Mp3g22740.1	PUB23	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Mp7g11000.1	PUB25	U-box domain-containing protein 25 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
Mp7g11020.1	PUB25	E3 ubiquitin ligase (PUB)	0.03	OrthoFinder output from all 47 species
Nbi_g04802	PUB25	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g06628	PUB25	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g08919	PUB25	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Ore_g29544	PUB23	E3 ubiquitin ligase & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g15483	PUB25	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g27483	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0064.g015794	PUB26	U-Box-group-III E3 ubiquitin ligase & original...	0.03	OrthoFinder output from all 47 species
Solyc01g007040.4.1	PUB22, Solyc01g007040	E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Solyc01g009330.1.1	PUB22, Solyc01g009330	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Spa_g08841	PUB25	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e014752_P001	PUB23, Zm00001e014752	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003613	Ubox_domain	50	117

External Links

No external refs found!

Ore_g44415 (PUB26)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation