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  5. Ore_g44293

Ore_g44293 (UPL2)


Aliases : UPL2

Description : not classified & original description: none


Gene families : OG0001042 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001042_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g44293

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00211330 UPL1,... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
AMTR_s00061p00204480 UPL1 Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
AT1G55860 UPL1 ubiquitin-protein ligase 1 0.04 OrthoFinder output from all 47 species
AT1G70320 UPL2 ubiquitin-protein ligase 2 0.07 OrthoFinder output from all 47 species
Adi_g005409 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g016298 UPL2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g052147 UPL2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g077941 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g107378 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g107426 UPL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g04900 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g16628 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g06583 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g06863 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.05 OrthoFinder output from all 47 species
Als_g14108 UPL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g40877 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27017 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g26360 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0087.g042300 UPL1 E3 ubiquitin ligase *(UPL1) & original description: CDS=382-11403 0.02 OrthoFinder output from all 47 species
Azfi_s0116.g046399 UPL1 E3 ubiquitin ligase *(UPL1) & original description: CDS=235-11562 0.03 OrthoFinder output from all 47 species
Ceric.10G067500.1 UPL2, Ceric.10G067500 E3 ubiquitin ligase *(UPL1) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.29G011900.1 UPL1, Ceric.29G011900 E3 ubiquitin ligase *(UPL1) & original description:... 0.04 OrthoFinder output from all 47 species
Cre01.g012450 UPL1 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Dcu_g12771 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g04957 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g05120 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g10043 UPL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g21297 UPL1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01009206001 UPL2 Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
GSVIVT01009208001 UPL2 E3 ubiquitin-protein ligase UPL2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_17424 UPL1 monomeric E3 ubiquitin ligase (HECT) 0.04 OrthoFinder output from all 47 species
Gb_26784 UPL2 E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os12g24080.1 UPL2, LOC_Os12g24080 monomeric E3 ubiquitin ligase (HECT) 0.02 OrthoFinder output from all 47 species
Len_g23822 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.02 OrthoFinder output from all 47 species
MA_20049g0010 UPL1 monomeric E3 ubiquitin ligase (HECT) 0.02 OrthoFinder output from all 47 species
MA_20049g0020 UPL1 E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_9308767g0010 UPL1 monomeric E3 ubiquitin ligase (HECT) 0.02 OrthoFinder output from all 47 species
Mp4g21620.1 UPL1 monomeric E3 ubiquitin ligase (HECT) 0.03 OrthoFinder output from all 47 species
Msp_g19139 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g48585 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g24640 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.04 OrthoFinder output from all 47 species
Smo154179 UPL2 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Solyc04g076620.4.1 UPL1, Solyc04g076620 monomeric E3 ubiquitin ligase (HECT) 0.02 OrthoFinder output from all 47 species
Spa_g23911 UPL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g40173 UPL1 E3 ubiquitin ligase *(UPL1) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g21189 UPL1 E3 ubiquiTin ligase *(UPL1) & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e009321_P001 UPL1, Zm00001e009321 monomeric E3 ubiquitin ligase (HECT) 0.02 OrthoFinder output from all 47 species
Zm00001e017836_P002 UPL1, Zm00001e017836 monomeric E3 ubiquitin ligase (HECT) 0.04 OrthoFinder output from all 47 species
Zm00001e039654_P001 UPL1, Zm00001e039654 monomeric E3 ubiquitin ligase (HECT) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR015940 UBA 1307 1343
IPR010309 E3_Ub_ligase_DUF908 85 367
IPR010314 E3_Ub_ligase_DUF913 429 789
No external refs found!