Ore_g44057 (CDF3)

Aliases : CDF3

Description : transcription factor *(DOF) & original description: none

Gene families : OG0000067 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ore_g44057
Cluster	HCCA: Cluster_77

Target	Alias	Description	ECC score	Gene Family Method
Adi_g022623	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g03146	TMO6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Als_g15817	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Als_g22545	CDF3	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
Als_g27376	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g14669	No alias	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene43236.t1	TMO6, Aspi01Gene43236	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene55828.t1	CDF2, Aspi01Gene55828	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene68681.t1	OBP4, Aspi01Gene68681	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g19275	CDF3	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g10677	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g18747	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g03006	No alias	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g27554	TMO6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Msp_g31889	No alias	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g03486	TMO6	transcription factor *(DOF) & original description: none	0.07	OrthoFinder output from all 47 species
Ore_g17090	CDF3	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g20737	TMO6	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g42292	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Pir_g14293	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g19390	TMO6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g05155	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g61765	DAG1	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g12133	CDF2	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g10425	No alias	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
Tin_g14914	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e003414_P001	OBP1, Zm00001e003414	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005096	GTPase activator activity	IEP	HCCA
MF	GO:0008047	enzyme activator activity	IEP	HCCA
MF	GO:0008270	zinc ion binding	IEP	HCCA
MF	GO:0030234	enzyme regulator activity	IEP	HCCA
MF	GO:0030695	GTPase regulator activity	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA
MF	GO:0060589	nucleoside-triphosphatase regulator activity	IEP	HCCA
MF	GO:0098772	molecular function regulator activity	IEP	HCCA
MF	GO:0140677	molecular function activator activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	96	152

External Links

No external refs found!

Ore_g44057 (CDF3)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation