Ore_g43900


Description : not classified & original description: none


Gene families : OG0000036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g43900

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00151950 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
AT3G24120 No alias Homeodomain-like superfamily protein 0.07 OrthoFinder output from all 47 species
AT4G17695 KAN3 Homeodomain-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G06800 No alias myb-like HTH transcriptional regulator family protein 0.03 OrthoFinder output from all 47 species
Adi_g057981 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Adi_g081643 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Adi_g108057 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g114670 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g47265 KAN, KAN1 KANADI-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g17750 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene33756.t1 Aspi01Gene33756 transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene55088.t1 Aspi01Gene55088 GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0089.g042590 No alias not classified & original description: CDS=1-831 0.05 OrthoFinder output from all 47 species
Azfi_s0481.g073115 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g27590 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g05684 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g14665 No alias transcription factor *(CLAUSA) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01025502001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
Gb_08427 KAN, KAN1 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Gb_25991 No alias G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Gb_25992 No alias G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Gb_38388 No alias PHR1 transcription factor involved in proline synthesis... 0.03 OrthoFinder output from all 47 species
LOC_Os02g14490.1 LOC_Os02g14490 Putative Myb family transcription factor At1g14600... 0.04 OrthoFinder output from all 47 species
LOC_Os03g21240.1 PHL1, LOC_Os03g21240 PHR1 transcription factor involved in proline synthesis... 0.04 OrthoFinder output from all 47 species
LOC_Os04g47890.1 LOC_Os04g47890 G2-like GARP transcription factor 0.04 OrthoFinder output from all 47 species
LOC_Os05g40960.1 LOC_Os05g40960 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os08g33050.1 KAN, KAN1, LOC_Os08g33050 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Len_g06559 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Mp4g01560.1 No alias G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Pir_g01814 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g32764 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g22623 KAN4, ATS KANADI-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005338 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sam_g19047 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Solyc04g008480.2.1 Solyc04g008480 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Solyc08g076010.4.1 Solyc08g076010 G2-like GARP transcription factor 0.05 OrthoFinder output from all 47 species
Solyc12g006280.3.1 Solyc12g006280 Putative Myb family transcription factor At1g14600... 0.03 OrthoFinder output from all 47 species
Tin_g18822 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Zm00001e015514_P001 KAN2, Zm00001e015514 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!