Aliases : SMG7
Description : Nonsense-Mediated mRNA Decay protein *(SMG7) & original description: none
Gene families : OG0001313 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001313_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Ore_g43522 | |
Cluster | HCCA: Cluster_40 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00046p00170580 | SMG7,... | RNA processing.RNA decay.Nonsense-Mediated mRNA Decay... | 0.03 | OrthoFinder output from all 47 species | |
Adi_g055840 | SMG7 | Nonsense-Mediated mRNA Decay protein *(SMG7) & original... | 0.06 | OrthoFinder output from all 47 species | |
Adi_g067504 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aev_g05541 | SMG7 | Nonsense-Mediated mRNA Decay protein *(SMG7) & original... | 0.04 | OrthoFinder output from all 47 species | |
Ala_g02690 | SMG7 | Nonsense-Mediated mRNA Decay protein *(SMG7) & original... | 0.03 | OrthoFinder output from all 47 species | |
Als_g15194 | SMG7 | Nonsense-Mediated mRNA Decay protein *(SMG7) & original... | 0.02 | OrthoFinder output from all 47 species | |
Ceric.27G021400.1 | SMG7, Ceric.27G021400 | Nonsense-Mediated mRNA Decay protein *(SMG7) & original... | 0.05 | OrthoFinder output from all 47 species | |
Dac_g12623 | SMG7 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g02039 | SMG7 | Nonsense-Mediated mRNA Decay protein *(SMG7) & original... | 0.05 | OrthoFinder output from all 47 species | |
Dcu_g23233 | SMG7 | Nonsense-Mediated mRNA Decay protein *(SMG7) & original... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01033622001 | SMG7 | RNA processing.RNA decay.Nonsense-Mediated mRNA Decay... | 0.04 | OrthoFinder output from all 47 species | |
Gb_21699 | SMG7 | SMG7 Nonsense-Mediated mRNA Decay protein | 0.03 | OrthoFinder output from all 47 species | |
Gb_38564 | SMG7 | SMG7 Nonsense-Mediated mRNA Decay protein | 0.03 | OrthoFinder output from all 47 species | |
Len_g48171 | SMG7 | Nonsense-Mediated mRNA Decay protein *(SMG7) & original... | 0.03 | OrthoFinder output from all 47 species | |
MA_32980g0010 | SMG7 | Protein SMG7 OS=Arabidopsis thaliana... | 0.07 | OrthoFinder output from all 47 species | |
Mp8g12080.1 | SMG7 | SMG7 Nonsense-Mediated mRNA Decay protein | 0.02 | OrthoFinder output from all 47 species | |
Pir_g07446 | SMG7 | Nonsense-Mediated mRNA Decay protein *(SMG7) & original... | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g05947 | SMG7 | Nonsense-Mediated mRNA Decay protein *(SMG7) & original... | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g11325 | SMG7 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sam_g16577 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sam_g25590 | No alias | Nonsense-Mediated mRNA Decay protein *(SMG7) & original... | 0.06 | OrthoFinder output from all 47 species | |
Spa_g17881 | SMG7 | Nonsense-Mediated mRNA Decay protein *(SMG7) & original... | 0.04 | OrthoFinder output from all 47 species | |
Spa_g22093 | SMG7 | Nonsense-Mediated mRNA Decay protein *(SMG7) & original... | 0.03 | OrthoFinder output from all 47 species | |
Tin_g09978 | SMG7 | Nonsense-Mediated mRNA Decay protein *(SMG7) & original... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e009613_P002 | SMG7, Zm00001e009613 | SMG7 Nonsense-Mediated mRNA Decay protein | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0005049 | nuclear export signal receptor activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
MF | GO:0016887 | ATP hydrolysis activity | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0036094 | small molecule binding | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
MF | GO:0140104 | molecular carrier activity | IEP | HCCA |
MF | GO:0140142 | nucleocytoplasmic carrier activity | IEP | HCCA |
MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
No external refs found! |