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  5. Ore_g43402

Ore_g43402 (LBD22)


Aliases : LBD22

Description : AS2/LOB-type transcription factor & original description: none


Gene families : OG0000114 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000114_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g43402
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00227160 LBD15, ASL11,... RNA biosynthesis.transcriptional activation.AS2/LOB... 0.01 OrthoFinder output from all 47 species
AMTR_s00058p00148530 LBD11,... RNA biosynthesis.transcriptional activation.AS2/LOB... 0.02 OrthoFinder output from all 47 species
Ala_g29995 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g09772 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene15025.t1 LBD19, Aspi01Gene15025 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g39794 LBD4 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46319 LBD20 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Gb_19720 LBD27, SCP transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
LOC_Os05g07270.1 LBD15, ASL11,... transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Len_g16017 AS2 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_108847g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_113501g0010 LBD12, ASL5, PCK1 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
MA_126761g0010 LBD20 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
MA_19148g0010 LBD11 transcription factor (AS2/LOB) 0.01 OrthoFinder output from all 47 species
MA_41152g0010 LBD4 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
MA_84752g0010 LBD15, ASL11 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
Mp7g00650.1 ASL1, LBD36 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Msp_g44922 LBD20 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g40723 AS2 AS2/LOB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g43401 No alias AS2/LOB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g21903 LBD22 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g22342 LBD27, SCP AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g24707 LBD22 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g09676 LBD20 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0186.g025054 LBD20 AS2/LOB-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Solyc01g091420.2.1 LBD18, Solyc01g091420 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
Solyc05g048740.3.1 LBD11, Solyc05g048740 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Zm00001e005215_P001 LBD4, Zm00001e005215 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Zm00001e031510_P001 LBD12, ASL5,... transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004883 LOB 46 143
No external refs found!