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  5. Ore_g42912

Ore_g42912 (HTA6)


Aliases : HTA6

Description : histone *(H2A) & original description: none


Gene families : OG0000117 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000117_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g42912

Target Alias Description ECC score Gene Family Method Actions
Adi_g023256 RAT5, HTA1, ATHTA1 histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g42846 HTA7 histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g62913 GAMMA-H2AX,... histone *(H2A) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g02581 RAT5, HTA1, ATHTA1 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.11G083100.1 HTA7, Ceric.11G083100 histone *(H2A) & original description: pacid=50596723... 0.03 OrthoFinder output from all 47 species
Ceric.1Z006200.1 HTA7, Ceric.1Z006200 histone *(H2A) & original description: pacid=50569283... 0.03 OrthoFinder output from all 47 species
Dac_g03954 GAMMA-H2AX,... histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12273 HTA6 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g04999 GAMMA-H2AX,... histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g09279 HTA7 histone *(H2A) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g09403 HTA7 histone *(H2A) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g64775 RAT5, HTA1, ATHTA1 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g10951 HTA6 histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g000823 GAMMA-H2AX,... histone *(H2A) & original description: CDS=1-471 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003725 double-stranded RNA binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 65 149
IPR032454 Histone_H2A_C 152 183
No external refs found!