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  5. Ore_g42728

Ore_g42728


Description : not classified & original description: none


Gene families : OG0001815 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001815_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g42728

Target Alias Description ECC score Gene Family Method Actions
AT1G30800 No alias Fasciclin-like arabinogalactan family protein 0.03 OrthoFinder output from all 47 species
AT4G29980 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.05 OrthoFinder output from all 47 species
AT5G40940 FLA20 putative fasciclin-like arabinogalactan protein 20 0.03 OrthoFinder output from all 47 species
Ceric.11G050800.1 Ceric.11G050800 not classified & original description: pacid=50596503... 0.03 OrthoFinder output from all 47 species
Ceric.19G016700.1 Ceric.19G016700 not classified & original description: pacid=50575888... 0.02 OrthoFinder output from all 47 species
Ceric.23G000500.1 Ceric.23G000500 not classified & original description: pacid=50611562... 0.02 OrthoFinder output from all 47 species
Ceric.27G033900.1 Ceric.27G033900 not classified & original description: pacid=50606120... 0.02 OrthoFinder output from all 47 species
Ceric.34G054200.1 Ceric.34G054200 not classified & original description: pacid=50623109... 0.02 OrthoFinder output from all 47 species
Dcu_g42902 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g42961 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g43111 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g50627 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g48590 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g54179 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g54460 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g56881 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g41571 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g42638 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g43221 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g43272 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g03841 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g04573 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0131.g022109 No alias not classified & original description: CDS=1-564 0.03 OrthoFinder output from all 47 species
Sam_g36002 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g40298 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g40299 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc05g008320.1.1 FLA20, Solyc05g008320 fasciclin-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species
Spa_g46225 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g47560 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g49061 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44448 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g46034 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR000782 FAS1_domain 34 138
No external refs found!