1. Home
  2. Species
  3. Ophioglossum reticulatum
  4. Sequence
  5. Ore_g42670

Ore_g42670


Description : not classified & original description: none


Gene families : OG0000556 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000556_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g42670

Target Alias Description ECC score Gene Family Method Actions
Aev_g06719 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g28820 AT-GTL1, GTL1, AT-GTL2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g57836 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene54632.t1 Aspi01Gene54632 Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene69749.t1 AT-GTL1, GTL1,... Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.36G000200.1 Ceric.36G000200 Trihelix-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dcu_g03068 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01026588001 No alias RNA biosynthesis.transcriptional activation.Trihelix... 0.03 OrthoFinder output from all 47 species
GSVIVT01035465001 No alias RNA biosynthesis.transcriptional activation.Trihelix... 0.04 OrthoFinder output from all 47 species
Gb_32610 No alias transcription factor (Trihelix) 0.03 OrthoFinder output from all 47 species
LOC_Os04g45750.1 LOC_Os04g45750 transcription factor (Trihelix) 0.02 OrthoFinder output from all 47 species
MA_331768g0010 No alias Trihelix transcription factor GT-2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Pnu_g16876 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0084.g018240 AT-GT2, GT2 Trihelix-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0157.g023745 No alias Trihelix-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Spa_g40341 No alias Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000272 polysaccharide catabolic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
MF GO:0008131 primary amine oxidase activity IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
MF GO:0009916 alternative oxidase activity IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR044822 Myb_DNA-bind_4 75 160
No external refs found!