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  5. Ore_g42541

Ore_g42541


Description : not classified & original description: none


Gene families : OG0000530 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000530_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g42541

Target Alias Description ECC score Gene Family Method Actions
Adi_g051862 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g03237 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g24201 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g36674 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.36G035300.1 Ceric.36G035300 not classified & original description: pacid=50568281... 0.02 OrthoFinder output from all 47 species
Dac_g39043 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g01335 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g24466 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26826 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os03g19090.1 LOC_Os03g19090 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_64016g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_70531g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g36535 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g14398 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g16010 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g17880 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g18168 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g24513 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g30524 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g43715 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g079350.1.1 Solyc04g079350 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g33678 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP HCCA
CC GO:0030132 clathrin coat of coated pit IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR012442 DUF1645_plant 84 238
No external refs found!