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  5. Aev_g18503

Aev_g18503 (VFB3)


Aliases : VFB3

Description : substrate adaptor *(VFB) of SCF E3 ubiquitin ligase complex & original description: none


Gene families : OG0001029 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001029_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g18503

Target Alias Description ECC score Gene Family Method Actions
AT4G07400 VFB3 VIER F-box proteine 3 0.02 OrthoFinder output from all 47 species
Len_g01263 VFB3 substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Nbi_g05363 VFB4, SKIP2 substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Ppi_g53377 VFB4, SKIP2 substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012208 VFB1 substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Sam_g25908 No alias substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Solyc03g044220.1.1 VFB4, SKIP2,... component FBX of SCF E3 ubiquitin ligase complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016872 intramolecular lyase activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 457 479
IPR001611 Leu-rich_rpt 201 223
IPR001611 Leu-rich_rpt 390 403
IPR041567 COI1_F-box 115 151
No external refs found!