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  5. Ore_g40680

Ore_g40680


Description : E3 ubiquitin ligase *(MEL) & original description: none


Gene families : OG0007227 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007227_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g40680

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00099260 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT5G11620 No alias SWIM zinc finger family protein / mitogen-activated... 0.02 OrthoFinder output from all 47 species
Ore_g40681 No alias E3 ubiquitin ligase *(MEL) & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g23057 No alias E3 ubiquitin ligase *(MEL) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc08g066550.3.1 Solyc08g066550 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
InterPro domains Description Start Stop
IPR007527 Znf_SWIM 126 154
No external refs found!