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  5. Ore_g40589

Ore_g40589 (HCF136)


Aliases : HCF136

Description : protein involved in PS-II assembly *(HCF136) & original description: none


Gene families : OG0006586 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006586_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g40589
Cluster HCCA: Cluster_127

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00083110 HCF136,... Photosynthesis.photophosphorylation.photosystem... 0.03 OrthoFinder output from all 47 species
AT5G23120 HCF136 photosystem II stability/assembly factor, chloroplast (HCF136) 0.07 OrthoFinder output from all 47 species
Adi_g023753 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.08 OrthoFinder output from all 47 species
Aev_g35613 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.06 OrthoFinder output from all 47 species
Ala_g31805 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.08 OrthoFinder output from all 47 species
Als_g23347 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.09 OrthoFinder output from all 47 species
Aob_g06472 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.07 OrthoFinder output from all 47 species
Aop_g09964 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.05 OrthoFinder output from all 47 species
Aspi01Gene29392.t1 HCF136, Aspi01Gene29392 protein involved in PS-II assembly *(HCF136) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0011.g012492 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.05 OrthoFinder output from all 47 species
Cba_g19514 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.05 OrthoFinder output from all 47 species
Ceric.10G037400.1 HCF136, Ceric.10G037400 protein involved in PS-II assembly *(HCF136) & original... 0.09 OrthoFinder output from all 47 species
Cre06.g273700 HCF136 Photosynthesis.photophosphorylation.photosystem... 0.03 OrthoFinder output from all 47 species
Dac_g14607 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.07 OrthoFinder output from all 47 species
Dcu_g01147 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.04 OrthoFinder output from all 47 species
Dde_g00586 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.1 OrthoFinder output from all 47 species
Ehy_g20509 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.07 OrthoFinder output from all 47 species
GSVIVT01012045001 HCF136 Photosynthesis.photophosphorylation.photosystem... 0.1 OrthoFinder output from all 47 species
Gb_03750 HCF136 HCF136 protein involved in PS-II assembly 0.09 OrthoFinder output from all 47 species
Len_g11400 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.11 OrthoFinder output from all 47 species
Lfl_g02953 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.09 OrthoFinder output from all 47 species
MA_10433328g0010 HCF136 HCF136 protein involved in PS-II assembly 0.11 OrthoFinder output from all 47 species
Mp4g23900.1 HCF136 HCF136 protein involved in PS-II assembly 0.11 OrthoFinder output from all 47 species
Nbi_g14696 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.1 OrthoFinder output from all 47 species
Pir_g10204 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.06 OrthoFinder output from all 47 species
Pnu_g05859 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.08 OrthoFinder output from all 47 species
Ppi_g00841 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009047 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.07 OrthoFinder output from all 47 species
Sam_g07654 No alias protein involved in PS-II assembly *(HCF136) & original... 0.03 OrthoFinder output from all 47 species
Smo227615 HCF136 Photosynthesis.photophosphorylation.photosystem... 0.05 OrthoFinder output from all 47 species
Solyc02g014150.4.1 HCF136, Solyc02g014150 HCF136 protein involved in PS-II assembly 0.08 OrthoFinder output from all 47 species
Spa_g12995 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.05 OrthoFinder output from all 47 species
Tin_g11749 HCF136 protein involved in PS-II assembly *(HCF136) & original... 0.11 OrthoFinder output from all 47 species
Zm00001e030125_P002 HCF136, Zm00001e030125 HCF136 protein involved in PS-II assembly 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005261 monoatomic cation channel activity IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015252 proton channel activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR028203 PSII_CF48-like_dom 96 414
No external refs found!