Ore_g40544


Description : histone demethylase *(JMJD6) & original description: none


Gene families : OG0001583 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001583_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g40544

Target Alias Description ECC score Gene Family Method Actions
Aev_g48829 No alias histone demethylase *(JMJD6) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.27G069900.1 Ceric.27G069900 histone demethylase *(JMJD6) & original description:... 0.02 OrthoFinder output from all 47 species
Sam_g15658 No alias histone demethylase *(JMJD6) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13107 No alias histone demethylase *(JMJD6) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004357 glutamate-cysteine ligase activity IEP HCCA
MF GO:0005096 GTPase activator activity IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
BP GO:0042398 cellular modified amino acid biosynthetic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR041667 Cupin_8 135 361
IPR001810 F-box_dom 15 52
No external refs found!