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  5. Ore_g40012

Ore_g40012


Description : not classified & original description: none


Gene families : OG0002525 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002525_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g40012

Target Alias Description ECC score Gene Family Method Actions
Adi_g001214 No alias ubiquitin E3 ligase *(CERBERUS/LIN) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g19831 PUB26 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g21868 No alias ubiquitin E3 ligase *(CERBERUS/LIN) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01026271001 No alias Putative E3 ubiquitin-protein ligase LIN-1 OS=Lotus japonicus 0.04 OrthoFinder output from all 47 species
LOC_Os01g12930.1 LOC_Os01g12930 ubiquitin E3 ligase (CERBERUS/LIN) 0.02 OrthoFinder output from all 47 species
Pir_g41495 No alias ubiquitin E3 ligase *(CERBERUS/LIN) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006541 glutamine metabolic process IEP HCCA
BP GO:0006542 glutamine biosynthetic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!