Zm00001d039449


Description : No description available


Gene families : OG_01_0000001 (Gene family) Phylogenetic Tree(s): OG0000001_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d039449
Cluster HCCA cluster: Cluster_173

Target Alias Description ECC score Gene Family Method Actions
AT1G06140 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 Gene family
AT1G17630 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.04 Gene family
AT1G20230 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Gene family
AT1G56570 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Gene family
AT2G27610 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 Gene family
AT2G39620 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Gene family
AT3G03580 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Gene family
AT3G25060 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Gene family
AT3G26540 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Gene family
AT4G15720 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Gene family
AT4G21065 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Gene family
AT4G39530 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Gene family
AT4G39952 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 Gene family
AT5G52850 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.05 Gene family
GSVIVT01000420001 No alias No description available 0.03 Gene family
GSVIVT01003256001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.06 Gene family
GSVIVT01007645001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
GSVIVT01011501001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
GSVIVT01015325001 No alias No description available 0.03 Gene family
GSVIVT01017763001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
GSVIVT01020758001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.05 Gene family
GSVIVT01021023001 No alias No description available 0.04 Gene family
GSVIVT01021756001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
GSVIVT01022230001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
GSVIVT01024493001 No alias No description available 0.07 Gene family
GSVIVT01024912001 No alias No description available 0.02 Gene family
GSVIVT01025639001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.05 Gene family
GSVIVT01026881001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.05 Gene family
GSVIVT01028819001 No alias No description available 0.07 Gene family
GSVIVT01029382001 No alias 35.1.27 not assigned.no ontology.tetratricopeptide... 0.07 Gene family
GSVIVT01030054001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
GSVIVT01031265001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
GSVIVT01031266001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.05 Gene family
GSVIVT01032394001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
GSVIVT01033004001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.06 Gene family
GSVIVT01033304001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
GSVIVT01033837001 No alias No description available 0.03 Gene family
GSVIVT01035618001 No alias No description available 0.03 Gene family
GSVIVT01035837001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
GSVIVT01036169001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
GSVIVT01036511001 No alias No description available 0.03 Gene family
GSVIVT01036943001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
GSVIVT01037332001 No alias No description available 0.02 Gene family
LOC_Os01g01115 Os01g0101150 No description available 0.08 Gene family
LOC_Os01g19380 Os01g0299150,... 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.06 Gene family
LOC_Os01g59890 Os01g0814300 35.2 not assigned.unknown Tetratricopeptide repeat... 0.07 Gene family
LOC_Os01g60250 Os01g0818200 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
LOC_Os01g60430 Os01g0819800 No description available 0.05 Gene family
LOC_Os01g72930 Os01g0959600 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.05 Gene family
LOC_Os01g74600 Os01g0977400 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
LOC_Os02g44480 Os02g0663900 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.08 Gene family
LOC_Os02g53050 Os02g0769900 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
LOC_Os02g58330 Os02g0830000 No description available 0.02 Gene family
LOC_Os03g11700 Os03g0216400 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.05 Gene family
LOC_Os03g16450 Os03g0271300 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.05 Gene family
LOC_Os04g35650 Os04g0436800 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
LOC_Os05g05490 Os05g0147600 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.09 Gene family
LOC_Os05g30710 Os05g0370000 No description available 0.07 Gene family
LOC_Os06g02200 Os06g0112000 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
LOC_Os07g05560 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.08 Gene family
LOC_Os07g10400 Os07g0203900,... 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
LOC_Os08g38610 Os08g0494200,... No description available 0.07 Gene family
LOC_Os08g40020 Os08g0511000 No description available 0.07 Gene family
LOC_Os09g38310 Os09g0555400 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
LOC_Os11g45410 Os11g0679900,... 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
LOC_Os12g01850 Os12g0109300 No description available 0.02 Gene family
LOC_Os12g06650 Os12g0163600 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.09 Gene family
MA_100519g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
MA_10429043g0020 No alias No description available 0.02 Gene family
MA_10429540g0020 No alias No description available 0.05 Gene family
MA_10429837g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
MA_106123g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
MA_107356g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
MA_11074g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
MA_116829g0010 No alias No description available 0.04 Gene family
MA_121267g0010 No alias No description available 0.02 Gene family
MA_122899g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
MA_13057g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
MA_136326g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
MA_14938g0010 No alias No description available 0.04 Gene family
MA_175688g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
MA_177435g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
MA_17949g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
MA_18165g0010 No alias No description available 0.02 Gene family
MA_183278g0010 No alias No description available 0.02 Gene family
MA_20746g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
MA_20782g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
MA_20899g0020 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
MA_210823g0010 No alias No description available 0.04 Gene family
MA_22485g0010 No alias No description available 0.03 Gene family
MA_252238g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
MA_27147g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
MA_2991g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
MA_31170g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
MA_322292g0010 No alias No description available 0.03 Gene family
MA_33151g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.06 Gene family
MA_3317g0020 No alias No description available 0.03 Gene family
MA_34492g0020 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
MA_38266g0010 No alias No description available 0.02 Gene family
MA_39263g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.05 Gene family
MA_445076g0010 No alias No description available 0.04 Gene family
MA_56322g0010 No alias No description available 0.03 Gene family
MA_56714g0010 No alias No description available 0.02 Gene family
MA_57048g0010 No alias No description available 0.02 Gene family
MA_61422g0020 No alias No description available 0.02 Gene family
MA_63139g0020 No alias No description available 0.04 Gene family
MA_65500g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
MA_656915g0010 No alias No description available 0.03 Gene family
MA_67032g0010 No alias No description available 0.02 Gene family
MA_683665g0010 No alias No description available 0.03 Gene family
MA_77437g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
MA_77675g0010 No alias No description available 0.04 Gene family
MA_81436g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
MA_8210920g0010 No alias No description available 0.04 Gene family
MA_83898g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
MA_86894g0010 No alias No description available 0.02 Gene family
MA_89214g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
MA_90090g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
MA_9526611g0020 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
MA_961981g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
MA_96662g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.05 Gene family
Smo100621 PACid_15401733 No description available 0.02 Gene family
Smo101 PACid_15417675 No description available 0.02 Gene family
Smo108652 PACid_15402830 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Smo123298 PACid_15421951 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
Smo130420 PACid_15421724 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Smo83034 PACid_15411135 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
Solyc01g006920.3.1 Solyc01g006920.3 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
Solyc01g010510.3.1 Solyc01g010510.3 No description available 0.02 Gene family
Solyc01g080190.3.1 Solyc01g080190.3 No description available 0.08 Gene family
Solyc01g081560.2.1 Solyc01g081560.2 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
Solyc02g079380.2.1 Solyc02g079380.2 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
Solyc02g088650.1.1 Solyc02g088650.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.18 Gene family
Solyc03g007840.1.1 Solyc03g007840.1 35.1.27 not assigned.no ontology.tetratricopeptide... 0.02 Gene family
Solyc03g025700.1.1 Solyc03g025700.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
Solyc03g063160.1.1 Solyc03g063160.1 No description available 0.02 Gene family
Solyc03g082830.2.1 Solyc03g082830.2 No description available 0.03 Gene family
Solyc03g093630.2.1 Solyc03g093630.2 No description available 0.03 Gene family
Solyc03g098420.3.1 Solyc03g098420.3 No description available 0.02 Gene family
Solyc03g111210.3.1 Solyc03g111210.3 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
Solyc03g114010.2.1 Solyc03g114010.2 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.05 Gene family
Solyc03g116000.1.1 Solyc03g116000.1 No description available 0.06 Gene family
Solyc04g063300.2.1 Solyc04g063300.2 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
Solyc04g064750.2.1 Solyc04g064750.2 No description available 0.01 Gene family
Solyc04g076330.2.1 Solyc04g076330.2 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.06 Gene family
Solyc05g012630.1.1 Solyc05g012630.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
Solyc05g023900.1.1 Solyc05g023900.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.09 Gene family
Solyc06g066080.1.1 Solyc06g066080.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.07 Gene family
Solyc06g082880.2.1 Solyc06g082880.2 No description available 0.08 Gene family
Solyc07g055310.1.1 Solyc07g055310.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.07 Gene family
Solyc08g023640.1.1 Solyc08g023640.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
Solyc08g078570.2.1 Solyc08g078570.2 No description available 0.07 Gene family
Solyc09g009950.3.1 Solyc09g009950.3 No description available 0.04 Gene family
Solyc09g059580.2.1 Solyc09g059580.2 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Solyc09g065710.1.1 Solyc09g065710.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
Solyc11g005960.1.1 Solyc11g005960.1 No description available 0.06 Gene family
Solyc11g007230.1.1 Solyc11g007230.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.13 Gene family
Solyc11g008940.1.1 Solyc11g008940.1 No description available 0.02 Gene family
Solyc11g008970.1.1 Solyc11g008970.1 No description available 0.04 Gene family
Solyc11g011860.1.1 Solyc11g011860.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Solyc11g066920.1.1 Solyc11g066920.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
Solyc11g067210.1.1 Solyc11g067210.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
Solyc11g071370.1.1 Solyc11g071370.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
Solyc12g006575.1.1 Solyc12g006575.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
Zm00001d013941 GRMZM2G073017 No description available 0.03 Gene family
Zm00001d016473 GRMZM2G328961 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Zm00001d018537 No alias No description available 0.04 Gene family
Zm00001d028422 GRMZM2G019689 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.09 Gene family
Zm00001d043081 GRMZM2G350410 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.06 Gene family
Zm00001d052794 GRMZM2G140600 No description available 0.04 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 352 399
IPR002885 Pentatricopeptide_repeat 74 119
IPR002885 Pentatricopeptide_repeat 250 297
IPR002885 Pentatricopeptide_repeat 216 245
IPR002885 Pentatricopeptide_repeat 426 451
IPR002885 Pentatricopeptide_repeat 187 206
No external refs found!