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  5. Aev_g18277

Aev_g18277 (GCN3, ATGCN3)


Aliases : GCN3, ATGCN3

Description : regulatory protein *(GCN20) of eIF2-alpha kinase activity & original description: none


Gene families : OG0006468 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006468_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g18277

Target Alias Description ECC score Gene Family Method Actions
Aop_g04328 GCN3, ATGCN3 regulatory protein *(GCN20) of eIF2-alpha kinase... 0.03 OrthoFinder output from all 47 species
Ceric.31G006600.1 GCN3, ATGCN3,... regulatory protein *(GCN20) of eIF2-alpha kinase... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020629.98 GCN3, ATGCN3 ABC transporter F family member 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Cre11.g478128 GCN3, ATGCN3 ABC transporter F family member 3 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Dcu_g01906 GCN3, ATGCN3 regulatory protein *(GCN20) of eIF2-alpha kinase... 0.03 OrthoFinder output from all 47 species
MA_8312073g0010 GCN3, ATGCN3 ABC transporter F family member 3 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp7g18200.1 GCN3, ATGCN3 ABC transporter F family member 3 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000149 SNARE binding IEP HCCA
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007030 Golgi organization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0019905 syntaxin binding IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
BP GO:0032324 molybdopterin cofactor biosynthetic process IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043545 molybdopterin cofactor metabolic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051189 prosthetic group metabolic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 200 411
IPR003439 ABC_transporter-like_ATP-bd 564 694
IPR032781 ABC_tran_Xtn 450 531
No external refs found!