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  5. Ore_g38428

Ore_g38428


Description : not classified & original description: none


Gene families : OG0001282 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001282_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g38428
Cluster HCCA: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00215000 DME,... DNA damage response.DNA repair mechanisms.base excision... 0.03 OrthoFinder output from all 47 species
Adi_g010467 DML1, ROS1 methylcytosine-specific DNA glycosylase *(ROS1) &... 0.03 OrthoFinder output from all 47 species
Ala_g14693 DML1, ROS1 methylcytosine-specific DNA glycosylase *(ROS1) &... 0.03 OrthoFinder output from all 47 species
Dde_g03513 DML1, ROS1 methylcytosine-specific DNA glycosylase *(ROS1) &... 0.03 OrthoFinder output from all 47 species
LOC_Os05g37410.1 DML1, ROS1,... methylcytosine-specific DNA glycosylase (ROS1).... 0.02 OrthoFinder output from all 47 species
Sam_g24868 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo182514 DML1, ROS1 Chromatin organisation.DNA methylation.ROS1-mediated DNA... 0.02 OrthoFinder output from all 47 species
Tin_g13462 DML1, ROS1 methylcytosine-specific DNA glycosylase *(ROS1) &... 0.02 OrthoFinder output from all 47 species
Tin_g16672 DML1, ROS1 methylcytosine-specific DNA glycosylase *(ROS1) &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!