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  5. Aev_g18205

Aev_g18205


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g18205

Target Alias Description ECC score Gene Family Method Actions
AT2G01510 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G08210 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G16835 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G39530 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g005657 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g024182 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g034887 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g050950 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g087422 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12351 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g04438 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04484 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05049 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05088 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06199 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06415 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06645 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07351 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g09957 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g16091 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g18939 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19798 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g29168 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g59722 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g05250 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0004.g008641 OTP84 not classified & original description: CDS=1-2628 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g010527 No alias not classified & original description: CDS=1-2745 0.04 OrthoFinder output from all 47 species
Azfi_s0022.g016134 OTP84 not classified & original description: CDS=1-2358 0.02 OrthoFinder output from all 47 species
Azfi_s0120.g046796 OTP84 not classified & original description: CDS=1-2868 0.02 OrthoFinder output from all 47 species
Azfi_s0144.g051566 No alias not classified & original description: CDS=1-1788 0.04 OrthoFinder output from all 47 species
Cba_g19916 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G015100.1 Ceric.04G015100 not classified & original description: pacid=50632156... 0.02 OrthoFinder output from all 47 species
Ceric.33G052800.1 Ceric.33G052800 not classified & original description: pacid=50607149... 0.03 OrthoFinder output from all 47 species
Dac_g03373 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g12616 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g21016 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04950 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06035 OTP84 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19510 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01005260001 No alias Pentatricopeptide repeat-containing protein At5g66520... 0.02 OrthoFinder output from all 47 species
GSVIVT01017823001 No alias Pentatricopeptide repeat-containing protein At2g36980,... 0.02 OrthoFinder output from all 47 species
GSVIVT01035491001 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.02 OrthoFinder output from all 47 species
Gb_17428 No alias Pentatricopeptide repeat-containing protein At4g04370... 0.02 OrthoFinder output from all 47 species
LOC_Os12g30620.1 LOC_Os12g30620 Pentatricopeptide repeat-containing protein At3g29230... 0.02 OrthoFinder output from all 47 species
Len_g37271 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g43892 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g36746 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10138132g0010 No alias Pentatricopeptide repeat-containing protein At3g02330,... 0.02 OrthoFinder output from all 47 species
Msp_g14157 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g05439 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g15418 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g18716 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25096 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25933 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g30106 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g32070 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g01500 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g42872 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13489 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13601 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g14457 DOT4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g18895 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g55721 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63503 DOT4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63511 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63803 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63807 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g16066 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g17865 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g23084 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g23568 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30620 OTP82 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g11996 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g18475 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0040.g012420 No alias not classified & original description: CDS=519-2384 0.02 OrthoFinder output from all 47 species
Sam_g02448 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g06558 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g30280 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g38015 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo399 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.02 OrthoFinder output from all 47 species
Smo78092 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.02 OrthoFinder output from all 47 species
Spa_g07598 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g09284 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g09530 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g53369 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g56457 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g05979 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g06632 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g11102 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14871 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17476 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g23272 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g24321 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007062 sister chromatid cohesion IEP HCCA
BP GO:0007064 mitotic sister chromatid cohesion IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
CC GO:0031390 Ctf18 RFC-like complex IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 625 649
IPR046848 E_motif 668 730
IPR032867 DYW_dom 766 858
IPR046849 Eplus_motif 736 762
IPR002885 Pentatricopeptide_repeat 550 598
IPR002885 Pentatricopeptide_repeat 45 94
IPR002885 Pentatricopeptide_repeat 248 295
IPR002885 Pentatricopeptide_repeat 348 396
IPR002885 Pentatricopeptide_repeat 146 195
IPR002885 Pentatricopeptide_repeat 449 497
No external refs found!