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  5. Ore_g37824

Ore_g37824


Description : not classified & original description: none


Gene families : OG0000596 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000596_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g37824
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
Adi_g108491 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g18260 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g18948 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g48359 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g16750 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g31589 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g38904 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g25488 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g37191 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g34345 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g16112 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01036253001 No alias Pentatricopeptide repeat-containing protein At1g12620... 0.02 OrthoFinder output from all 47 species
Len_g20281 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g31072 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g46948 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g54744 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g27390 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g29463 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_33956g0010 No alias Pentatricopeptide repeat-containing protein At3g53700,... 0.02 OrthoFinder output from all 47 species
MA_7256709g0010 No alias Pentatricopeptide repeat-containing protein At1g05670,... 0.02 OrthoFinder output from all 47 species
Ore_g02131 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g30845 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo52385 No alias Pentatricopeptide repeat-containing protein At1g62910... 0.02 OrthoFinder output from all 47 species
Tin_g19161 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0046903 secretion IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:1901981 phosphatidylinositol phosphate binding IEP HCCA
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 1 31
IPR002885 Pentatricopeptide_repeat 36 82
No external refs found!