Zm00001d039142 (GRMZM2G163809)

Aliases : GRMZM2G163809

Description : secondary metabolism.isoprenoids.mevalonate pathway.geranyl diphosphate synthase Encodes a protein with solanesyl diphosphate synthase activity. solanesyl diphosphate synthase 2 (SPS2)

Gene families : OG_01_0005055 (Gene family) Phylogenetic Tree(s): OG0005055_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d039142
Cluster HCCA cluster: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AT1G17050 SPS2 solanesyl diphosphate synthase 2 0.08 Gene family
AT1G78510 SPS1 solanesyl diphosphate synthase 1 0.07 Gene family
Cre13.g565650 No alias 16.1.5 secondary metabolism.isoprenoids.terpenoids... 0.05 Gene family
GSVIVT01014066001 No alias secondary metabolism.isoprenoids.mevalonate... 0.07 Gene family
LOC_Os05g50550 Os05g0582300 16.1.5 secondary metabolism.isoprenoids.terpenoids... 0.1 Gene family
LOC_Os12g17320 Os12g0271700 secondary metabolism.isoprenoids.mevalonate... 0.02 Gene family
Smo177791 PACid_15406521 16.1.5 secondary metabolism.isoprenoids.terpenoids... 0.05 Gene family
Solyc07g061990.3.1 Solyc07g061990.3 16.1.5 secondary metabolism.isoprenoids.terpenoids... 0.03 Gene family

Type GO Term Name Evidence Source
BP GO:0008299 isoprenoid biosynthetic process IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000092 Polyprenyl_synt 113 358
No external refs found!