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  5. Ore_g37045

Ore_g37045 (ATHDA15, HDA15)


Aliases : ATHDA15, HDA15

Description : class-II histone deacetylase & original description: none


Gene families : OG0001559 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001559_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g37045

Target Alias Description ECC score Gene Family Method Actions
Cre11.g467706 ATHDA18, HDA18 Chromatin organisation.histone modifications.histone... 0.02 OrthoFinder output from all 47 species
Dcu_g14604 ATHDA15, HDA15 class-II histone deacetylase & original description: none 0.02 OrthoFinder output from all 47 species
Gb_27929 ATHDA15, HDA15 Histone deacetylase 15 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e032874_P003 ATHDA15, HDA15,... class-II histone deacetylase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR023801 His_deacetylse_dom 230 517
No external refs found!