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  5. Ore_g36824

Ore_g36824


Description : not classified & original description: none


Gene families : OG0004428 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004428_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g36824

Target Alias Description ECC score Gene Family Method Actions
AT2G34357 No alias ARM repeat superfamily protein 0.06 OrthoFinder output from all 47 species
Adi_g021099 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0008.g011517 No alias not classified & original description: CDS=97-4008 0.04 OrthoFinder output from all 47 species
Ceric.18G047800.1 Ceric.18G047800 not classified & original description: pacid=50622555... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020554.42 No alias No description available 0.04 OrthoFinder output from all 47 species
Cre19.g751197 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g11589 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dde_g08172 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05092 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os02g54110.1 LOC_Os02g54110 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g20663 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10433024g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_242029g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_55053g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp1g25050.1 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Smo78845 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc07g042380.4.1 Solyc07g042380 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g29647 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09496 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e016059_P003 Zm00001e016059 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0017025 TBP-class protein binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140296 general transcription initiation factor binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR012978 RRP12-like_dom 406 608
No external refs found!