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  5. Aev_g18072

Aev_g18072


Description : not classified & original description: none


Gene families : OG0000018 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0000018_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g18072
Cluster HCCA: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
Gb_03512 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 39 species
Gb_08618 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 39 species
Gb_09654 No alias RNA editing factor (MEF13) 0.02 OrthoFinder output from all 39 species
Gb_19924 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.02 OrthoFinder output from all 39 species
Gb_26159 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.02 OrthoFinder output from all 39 species
Gb_27879 VAC1, ECB2, ATECB2 RNA editing factor (ECB2/VAC1) 0.02 OrthoFinder output from all 39 species
Gb_27891 OTP86 RNA editing factor (OTP86) 0.01 OrthoFinder output from all 39 species
Gb_27979 OTP84 Pentatricopeptide repeat-containing protein At2g22070... 0.02 OrthoFinder output from all 39 species
Gb_28612 LOI1, MEF11 RNA editing factor (MEF11) 0.02 OrthoFinder output from all 39 species
Gb_28780 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 39 species
Gb_29879 CRR22 RNA editing factor (MEF19). RNA editing factor (OTP82) 0.02 OrthoFinder output from all 39 species
Gb_29880 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.02 OrthoFinder output from all 39 species
Gb_29881 OTP86 Pentatricopeptide repeat-containing protein At4g21300... 0.02 OrthoFinder output from all 39 species
Gb_34299 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 39 species
Gb_35042 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 39 species
Gb_41648 OTP84 Pentatricopeptide repeat-containing protein DOT4,... 0.02 OrthoFinder output from all 39 species
MA_101084g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.01 OrthoFinder output from all 39 species
MA_10429371g0010 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.02 OrthoFinder output from all 39 species
MA_16226g0010 OTP86 Pentatricopeptide repeat-containing protein At3g63370,... 0.01 OrthoFinder output from all 39 species
MA_27726g0010 VAC1, ECB2, ATECB2 RNA editing factor (ECB2/VAC1) 0.02 OrthoFinder output from all 39 species
MA_35889g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.01 OrthoFinder output from all 39 species
MA_36643g0010 CRR22 Pentatricopeptide repeat-containing protein At3g03580... 0.02 OrthoFinder output from all 39 species
MA_49292g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 39 species
MA_49545g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 39 species
MA_519985g0010 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.01 OrthoFinder output from all 39 species
MA_835083g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 39 species
MA_83898g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 39 species
MA_961981g0010 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.01 OrthoFinder output from all 39 species
MA_96662g0010 CRR22 Pentatricopeptide repeat-containing protein At3g57430,... 0.02 OrthoFinder output from all 39 species
MA_9741g0010 CRR2 Pentatricopeptide repeat-containing protein At4g02750... 0.01 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 1 56
IPR046849 Eplus_motif 158 184
IPR032867 DYW_dom 189 277
IPR046848 E_motif 93 153
No external refs found!