Ore_g36629 (SMG7)


Aliases : SMG7

Description : Nonsense-Mediated mRNA Decay protein *(SMG7) & original description: none


Gene families : OG0001313 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001313_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g36629
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
Adi_g055840 SMG7 Nonsense-Mediated mRNA Decay protein *(SMG7) & original... 0.06 OrthoFinder output from all 47 species
Adi_g067504 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g02607 SMG7 Nonsense-Mediated mRNA Decay protein *(SMG7) & original... 0.03 OrthoFinder output from all 47 species
Ala_g02690 SMG7 Nonsense-Mediated mRNA Decay protein *(SMG7) & original... 0.07 OrthoFinder output from all 47 species
Als_g15194 SMG7 Nonsense-Mediated mRNA Decay protein *(SMG7) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene18429.t1 SMG7, Aspi01Gene18429 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene41024.t1 SMG7, Aspi01Gene41024 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g15989 SMG7 Nonsense-Mediated mRNA Decay protein *(SMG7) & original... 0.03 OrthoFinder output from all 47 species
Cre16.g648750 SMG7 Protein SMG7 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dcu_g02039 SMG7 Nonsense-Mediated mRNA Decay protein *(SMG7) & original... 0.05 OrthoFinder output from all 47 species
Dde_g41012 SMG7 Nonsense-Mediated mRNA Decay protein *(SMG7) & original... 0.02 OrthoFinder output from all 47 species
LOC_Os08g21350.1 SMG7, LOC_Os08g21350 SMG7 Nonsense-Mediated mRNA Decay protein 0.03 OrthoFinder output from all 47 species
Len_g28232 SMG7 Nonsense-Mediated mRNA Decay protein *(SMG7) & original... 0.03 OrthoFinder output from all 47 species
MA_32980g0010 SMG7 Protein SMG7 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp8g12080.1 SMG7 SMG7 Nonsense-Mediated mRNA Decay protein 0.03 OrthoFinder output from all 47 species
Msp_g18455 SMG7 Nonsense-Mediated mRNA Decay protein *(SMG7) & original... 0.03 OrthoFinder output from all 47 species
Pir_g07446 SMG7 Nonsense-Mediated mRNA Decay protein *(SMG7) & original... 0.02 OrthoFinder output from all 47 species
Ppi_g11325 SMG7 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g25590 No alias Nonsense-Mediated mRNA Decay protein *(SMG7) & original... 0.03 OrthoFinder output from all 47 species
Smo410159 SMG7 RNA processing.RNA decay.Nonsense-Mediated mRNA Decay... 0.03 OrthoFinder output from all 47 species
Tin_g09978 SMG7 Nonsense-Mediated mRNA Decay protein *(SMG7) & original... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR019458 Est1-like_N 85 214
IPR018834 DNA/RNA-bd_Est1-type 228 511
No external refs found!