Pp3c12_23410V3.1


Description : glycine-rich RNA-binding protein 3


Gene families : OG_01_0000043 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000043_tree ,
OG_02_0000394 (LandPlants) Phylogenetic Tree(s): OG_02_0000394_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c12_23410V3.1
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00103290 evm_27.TU.AmTr_v1... Organelle RRM domain-containing protein 2, mitochondrial... 0.02 Archaeplastida
AMTR_s00030p00132070 evm_27.TU.AmTr_v1... Glycine-rich RNA-binding protein RZ1A OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00166p00060690 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.RNA... 0.02 Archaeplastida
AT1G74230 GR-RBP5 glycine-rich RNA-binding protein 5 0.02 Archaeplastida
AT3G23830 GR-RBP4, GRP4 glycine-rich RNA-binding protein 4 0.05 Archaeplastida
AT4G13850 GRP2, ATGRP2, GR-RBP2 glycine-rich RNA-binding protein 2 0.07 Archaeplastida
AT5G04280 No alias RNA-binding (RRM/RBD/RNP motifs) family protein with... 0.05 Archaeplastida
AT5G59865 No alias No description available 0.02 Archaeplastida
AT5G61030 GR-RBP3 glycine-rich RNA-binding protein 3 0.03 Archaeplastida
Cre17.g725301 No alias No description available 0.02 Archaeplastida
Cre17.g729150 No alias No description available 0.02 Archaeplastida
GSVIVT01021024001 No alias RNA processing.organelle machineries.RNA... 0.06 Archaeplastida
Gb_07052 No alias RNA editing factor (ORRM) 0.02 Archaeplastida
Gb_11567 No alias Small RNA-binding protein 11, chloroplastic... 0.03 Archaeplastida
Gb_29798 No alias RNA-binding protein CP29B, chloroplastic OS=Arabidopsis... 0.02 Archaeplastida
Gb_40269 No alias RNA chaperone (RZ1|GR-RBP) 0.02 Archaeplastida
LOC_Os03g46770.1 No alias RNA chaperone (RZ1|GR-RBP) 0.02 Archaeplastida
MA_10436424g0010 No alias RNA chaperone (RZ1|GR-RBP) 0.04 Archaeplastida
MA_10436734g0010 No alias RNA editing factor (ORRM) 0.02 Archaeplastida
MA_147273g0010 No alias RNA editing factor (ORRM) 0.02 Archaeplastida
MA_77292g0010 No alias RNA editing factor (ORRM) 0.03 Archaeplastida
Mp3g06220.1 No alias 28 kDa ribonucleoprotein, chloroplastic OS=Spinacia... 0.03 Archaeplastida
Mp3g24820.1 No alias RNA-binding protein CP31B, chloroplastic OS=Arabidopsis... 0.02 Archaeplastida
Mp4g15980.1 No alias RNA chaperone (RZ1|GR-RBP) 0.02 Archaeplastida
Pp3c4_6610V3.1 No alias glycine-rich RNA-binding protein 3 0.04 Archaeplastida
Solyc01g104840.4.1 No alias RNA chaperone (RZ1|GR-RBP) 0.07 Archaeplastida
Solyc10g081180.2.1 No alias RNA chaperone (RZ1|GR-RBP). RNA editing factor (ORRM) 0.04 Archaeplastida
Zm00001e028481_P002 No alias RNA chaperone (RZ1|GR-RBP). RNA editing factor (ORRM) 0.05 Archaeplastida
Zm00001e035491_P001 No alias RNA editing factor (ORRM) 0.02 Archaeplastida
Zm00001e040294_P001 No alias RNA editing factor (ORRM) 0.04 Archaeplastida
AT3G23830 GR-RBP4, GRP4 glycine-rich RNA-binding protein 4 0.04 LandPlants
AT4G13850 GRP2, ATGRP2, GR-RBP2 glycine-rich RNA-binding protein 2 0.06 LandPlants
AT5G59865 No alias No description available 0.02 LandPlants
AT5G61030 GR-RBP3 glycine-rich RNA-binding protein 3 0.03 LandPlants
GSVIVT01021024001 No alias RNA processing.organelle machineries.RNA... 0.05 LandPlants
MA_10436734g0010 No alias RNA editing factor (ORRM) 0.02 LandPlants
MA_147273g0010 No alias RNA editing factor (ORRM) 0.02 LandPlants
Pp3c4_6610V3.1 No alias glycine-rich RNA-binding protein 3 0.04 LandPlants
Solyc05g053780.4.1 No alias RNA chaperone (RZ1|GR-RBP). RNA editing factor (ORRM) 0.02 LandPlants
Solyc10g081180.2.1 No alias RNA chaperone (RZ1|GR-RBP). RNA editing factor (ORRM) 0.04 LandPlants
Zm00001e028481_P002 No alias RNA chaperone (RZ1|GR-RBP). RNA editing factor (ORRM) 0.04 LandPlants

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000504 RRM_dom 47 117
No external refs found!